Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2210 |
Symbol | |
ID | 5869999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2468623 |
End bp | 2469102 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641547335 |
Product | aromatic-ring-hydroxylating dioxygenase beta subunit |
Protein accession | YP_001668447 |
Protein GI | 167033216 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5517] Small subunit of phenylpropionate dioxygenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.72478 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGAACC TGAACCTGTT CAACGAAGTC ACCGCGTTCA TCTGGCAGGA AGGCGACATG CTCGACCATG GCGAGTACGA CGCCTGGCTC AACCTGTGGA CTGACAAAGG CACCTACATC ATCCCGATCG ACCCCAAGGA AAGCGACTAC GAGAACACCT TGAACTACGC CTATGACGAC CACCACATGC GTGCCCTGCG TGTGCAGCGG CTCATCGGTG GCGAGTCGAT CTCGACCAGC CCGCAGCCAC GTACCGTGCG CACGATTTCG CGTATCCGTG TGCTCGCGGA CGACGGCGTC AATGTCACCG TGCGCGCTGC GCAGAACGTG CGCGAGTTCC GCAAGGAAAG CCTCAAGCAC TACAGCGCCG ACCTCACGTA CACCCTGGTG CGAGCCGAGG GCGGGTTCAG GGTCCATCGC AAGGTGATCA GCCTGATCAA CAGTGACGAT ACCCTCGCCG GTATCGGCTA CATCCTCTGA
|
Protein sequence | MMNLNLFNEV TAFIWQEGDM LDHGEYDAWL NLWTDKGTYI IPIDPKESDY ENTLNYAYDD HHMRALRVQR LIGGESISTS PQPRTVRTIS RIRVLADDGV NVTVRAAQNV REFRKESLKH YSADLTYTLV RAEGGFRVHR KVISLINSDD TLAGIGYIL
|
| |