Gene Swit_0743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0743 
Symbol 
ID5199187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp824003 
End bp824518 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content65% 
IMG OID640580287 
Productaromatic-ring-hydroxylating dioxygenase, beta subunit 
Protein accessionYP_001261248 
Protein GI148553666 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.158258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACGA TCGCTGAACC CCTGAACCGT TCCGACGCGG CGGCGGCGCC GTCGCTGCAG 
GACGCGATCC AGTTCGTCTG GGCCGAGGCC GACATGCTCG ACCGGCTCGA CTACAAGGCC
TGGCTGCCGC TGTGGACCGA GGACGGCCGC TACATCGTCC CGACCGAGCG CGACATCAGC
GACTATGACG ACCGGCTCAA CATCCTCAAC GACGATGCCG AGATGCGGCA GGCGCGCGTC
AAGCGGCTGT TGTCGGGCTT CTCGATGTCG TCGGCGCCGC CGGCCCGCAC CGTCCGCACC
GTCTCGCGCT TCGTGCCGGT CGTGGTCGAG GACGGCGCGA TCACGCTGCG CGCGGCGATG
ATCATGGTCG AGTATAAATA TGAGCGGATG CGCACCATGG CGGCCGACGT CGTCTACCGT
ATCGTCTCGA CCGCCGACGG GCTGAAGCTC GACCGGAAGA TCGTCACGCT GGTCAATTGC
GACGATTACC AGCATGGTAT CGGCTATCTT CTCTAA
 
Protein sequence
MSTIAEPLNR SDAAAAPSLQ DAIQFVWAEA DMLDRLDYKA WLPLWTEDGR YIVPTERDIS 
DYDDRLNILN DDAEMRQARV KRLLSGFSMS SAPPARTVRT VSRFVPVVVE DGAITLRAAM
IMVEYKYERM RTMAADVVYR IVSTADGLKL DRKIVTLVNC DDYQHGIGYL L