Gene Saro_3813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3813 
Symbol 
ID5077961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp468548 
End bp469045 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content63% 
IMG OID640481536 
Productaromatic-ring-hydroxylating dioxygenase, beta subunit 
Protein accessionYP_001166198 
Protein GI146276038 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.257439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGA CGACACTGGA TCAGCAGGCG GTCACCCTCG CCGATCTAAC CGCCTTCGTG 
TGGCGCGAGG CCGACATGCT CGACAGGCTG GACTACAAGG CCTGGCTCCG GCTGTGGAGC
GAGGATGGCC TCTACATCGT GCCGGTGGAA CGCGGTGCGA TCGATCATGC CAATGCGGTC
AATGTTCTGT ACGACGATGC CGAGATGCGC GAAATGCGGG TAAAGCGTTT GCTCAGCGGC
TTCTCGATGA GCAGCGCCCC GCCAGCGCGG ACGGTGCGCA CCGTCTCCCG CATTGTCGAA
ACGGCGCGCA GTGCGGATGC GGTGGACCTG CGCGCCGCGC AGATCCTTGT CGAATACAAG
TACGAACGGC ACCGCATGCT TGCTGCCGAT GTCGACTATC GCATCGCGAT CACCGCTGGC
GGTCTGAAGC TTGCGCGCAA GGTGGTGACG CTGGTCAATT GCGACGATGC CCTGCACGGC
ATCGGCTATC TTCTCTGA
 
Protein sequence
MSATTLDQQA VTLADLTAFV WREADMLDRL DYKAWLRLWS EDGLYIVPVE RGAIDHANAV 
NVLYDDAEMR EMRVKRLLSG FSMSSAPPAR TVRTVSRIVE TARSADAVDL RAAQILVEYK
YERHRMLAAD VDYRIAITAG GLKLARKVVT LVNCDDALHG IGYLL