20 homologs were found in PanDaTox collection
for query gene Sden_0427 on replicon NC_007954
Organism: Shewanella denitrificans OS217



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007954  Sden_0427  transciptional regulator  100 
 
 		 82 aa  165  2e-40  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
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NC_011663  Sbal223_0669  transcriptional regulator, XRE family  81.08 
 
 		 78 aa  125  2.0000000000000002e-28  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
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NC_008322  Shewmr7_0557  XRE family transcriptional regulator  75.64 
 
 		 78 aa  125  3e-28  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.948289 
 
 
-
 
NC_004347  SO_0705  Cro/CI family transcriptional regulator  78.67 
 
 		 97 aa  124  4.0000000000000003e-28  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_0649  XRE family transcriptional regulator  79.73 
 
 		 78 aa  123  9e-28  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
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NC_009997  Sbal195_0677  XRE family transcriptional regulator  79.73 
 
 		 78 aa  123  9e-28  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
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NC_008321  Shewmr4_3396  XRE family transcriptional regulator  78.67 
 
 		 97 aa  123  1e-27  Shewanella sp. MR-4  Bacteria  normal  1  hitchhiker  0.00158475 
 
 
-
 
NC_008345  Sfri_3656  transcriptional regulator, XRE family protein  76.92 
 
 		 78 aa  122  1e-27  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_0478  XRE family transcriptional regulator  73.08 
 
 		 78 aa  119  9.999999999999999e-27  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_4570  XRE family transcriptional regulator  56.41 
 
 		 82 aa  86.7  1e-16  Shewanella woodyi ATCC 51908  Bacteria  normal  1  unclonable  0.000000015798 
 
 
-
 
NC_009831  Ssed_0376  XRE family transcriptional regulator  52.56 
 
 		 82 aa  84.3  5e-16  Shewanella sediminis HAW-EB3  Bacteria  normal  1  unclonable  0.0000000000453716 
 
 
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NC_007954  Sden_0433  Cro/CI family transcriptional regulator  87.23 
 
 		 51 aa  84  6e-16  Shewanella denitrificans OS217  Bacteria  normal  0.248324  n/a   
 
 
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NC_010622  Bphy_1067  XRE family transcriptional regulator  41.38 
 
 		 86 aa  50.8  0.000006  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.753603 
 
 
-
 
NC_006368  lpp1916  hypothetical protein  37.88 
 
 		 93 aa  47.8  0.00005  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009441  Fjoh_1649  XRE family transcriptional regulator  40.74 
 
 		 80 aa  44.3  0.0006  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_008391  Bamb_4541  XRE family transcriptional regulator  37.7 
 
 		 108 aa  44.3  0.0006  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010087  Bmul_5392  helix-turn-helix domain-containing protein  32.86 
 
 		 183 aa  41.6  0.004  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.471231  normal  0.0187132 
 
 
-
 
NC_006369  lpl1905  hypothetical protein  37.5 
 
 		 75 aa  41.6  0.004  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
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NC_010515  Bcenmc03_5133  XRE family transcriptional regulator  36.84 
 
 		 111 aa  40.4  0.008  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.93216  normal  0.775541 
 
 
-
 
NC_012792  Vapar_5937  transcriptional regulator, XRE family  36.36 
 
 		 108 aa  40.4  0.009  Variovorax paradoxus S110  Bacteria  normal  0.496478  n/a   
 
 
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