Gene Ssed_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0376 
Symbol 
ID5613261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp441134 
End bp441382 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content43% 
IMG OID640931208 
ProductXRE family transcriptional regulator 
Protein accessionYP_001472117 
Protein GI157373517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000453716 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCTCACTC AATTCGATCC AAACACCTTA GGCAAACTAA TCAAAGACCG CCGAAAGGCC 
GCTGACATGA ATCAGGAAAT AGCCGCATCA TTCTGTGGTG TTACCAAGAA GACCTTGATC
AGAGTCGAAA AAGGCGAAGA TGTGTACTTT TCAACGATAA TCAAAATCCT CAATGGCCTT
GGTATAAAGC TGACCGTCGA GACTCCTAAT AGCAAAAACA AATTAGGTGG CAGCAATGAG
TGGTTCTAA
 
Protein sequence
MLTQFDPNTL GKLIKDRRKA ADMNQEIAAS FCGVTKKTLI RVEKGEDVYF STIIKILNGL 
GIKLTVETPN SKNKLGGSNE WF