Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0376 |
Symbol | |
ID | 5613261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 441134 |
End bp | 441382 |
Gene Length | 249 bp |
Protein Length | 82 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640931208 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001472117 |
Protein GI | 157373517 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000453716 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGCTCACTC AATTCGATCC AAACACCTTA GGCAAACTAA TCAAAGACCG CCGAAAGGCC GCTGACATGA ATCAGGAAAT AGCCGCATCA TTCTGTGGTG TTACCAAGAA GACCTTGATC AGAGTCGAAA AAGGCGAAGA TGTGTACTTT TCAACGATAA TCAAAATCCT CAATGGCCTT GGTATAAAGC TGACCGTCGA GACTCCTAAT AGCAAAAACA AATTAGGTGG CAGCAATGAG TGGTTCTAA
|
Protein sequence | MLTQFDPNTL GKLIKDRRKA ADMNQEIAAS FCGVTKKTLI RVEKGEDVYF STIIKILNGL GIKLTVETPN SKNKLGGSNE WF
|
| |