32 homologs were found in PanDaTox collection
for query gene Sala_2789 on replicon NC_008048
Organism: Sphingopyxis alaskensis RB2256



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008048  Sala_2789  TetR family transcriptional regulator  100 
 
 		 203 aa  396  1e-109  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  0.384058 
 
 
-
 
NC_012848  Rleg_4990  transcriptional regulator, TetR family  37 
 
 		 212 aa  100  1e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.613992  normal  1 
 
 
-
 
NC_008541  Arth_3112  TetR family transcriptional regulator  37.69 
 
 		 207 aa  94.7  7e-19  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_0875  transcriptional regulator, TetR family  33.33 
 
 		 209 aa  89.7  2e-17  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_3415  transcriptional regulator, TetR family  33.33 
 
 		 209 aa  88.2  8e-17  Pectobacterium wasabiae WPP163  Bacteria  normal  0.52107  n/a   
 
 
-
 
NC_013131  Caci_6234  transcriptional regulator, TetR family  39.08 
 
 		 214 aa  86.7  2e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.662077  normal  0.711722 
 
 
-
 
NC_009832  Spro_4739  TetR family transcriptional regulator  32.98 
 
 		 217 aa  84.7  8e-16  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012880  Dd703_3031  transcriptional regulator, TetR family  31.09 
 
 		 205 aa  84  0.000000000000001  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_010465  YPK_4006  TetR family transcriptional regulator  33.33 
 
 		 228 aa  84.3  0.000000000000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A0546  TetR family transcriptional regulator  33.33 
 
 		 228 aa  84.3  0.000000000000001  Yersinia pestis Angola  Bacteria  normal  0.62495  normal  1 
 
 
-
 
NC_009708  YpsIP31758_0210  TetR family transcriptional regulator  34.01 
 
 		 221 aa  84.3  0.000000000000001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_1922  transcriptional regulator, TetR family  26.09 
 
 		 210 aa  82.8  0.000000000000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.0515657  normal  0.344284 
 
 
-
 
NC_008784  BMASAVP1_0589  hypothetical protein  32.04 
 
 		 341 aa  76.6  0.0000000000002  Burkholderia mallei SAVP1  Bacteria  normal  0.684153  n/a   
 
 
-
 
NC_008835  BMA10229_0699  hypothetical protein  32.04 
 
 		 338 aa  76.6  0.0000000000002  Burkholderia mallei NCTC 10229  Bacteria  normal  0.299256  n/a   
 
 
-
 
NC_009079  BMA10247_A1654  hypothetical protein  32.04 
 
 		 338 aa  76.6  0.0000000000002  Burkholderia mallei NCTC 10247  Bacteria  normal  0.900303  n/a   
 
 
-
 
NC_009075  BURPS668_A2102  TetR family transcriptional regulator  32.66 
 
 		 333 aa  75.9  0.0000000000004  Burkholderia pseudomallei 668  Bacteria  normal  0.0307267  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0516  TetR family transcriptional regulator  32.66 
 
 		 378 aa  75.5  0.0000000000006  Burkholderia pseudomallei 1710b  Bacteria  normal  0.477479  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2007  TetR family transcriptional regulator  32.66 
 
 		 341 aa  75.1  0.0000000000006  Burkholderia pseudomallei 1106a  Bacteria  normal  0.820101  n/a   
 
 
-
 
NC_006349  BMAA0758.1  hypothetical protein  31.58 
 
 		 773 aa  73.2  0.000000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II0885  TetR family transcriptional regulator  32.12 
 
 		 340 aa  71.6  0.000000000007  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009621  Smed_5857  TetR family transcriptional regulator  36.21 
 
 		 220 aa  71.2  0.00000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.664827  normal  1 
 
 
-
 
NC_013037  Dfer_1760  TetR family transcriptional regulator  29.41 
 
 		 138 aa  56.2  0.0000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.255484  normal  0.206425 
 
 
-
 
NC_012669  Bcav_0928  transcriptional regulator, TetR family  44.29 
 
 		 184 aa  45.8  0.0004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.312785  normal  1 
 
 
-
 
NC_009077  Mjls_1994  TetR family transcriptional regulator  35 
 
 		 173 aa  44.7  0.001  Mycobacterium sp. JLS  Bacteria  normal  0.187018  normal  0.996586 
 
 
-
 
NC_008704  Mkms_5998  TetR family transcriptional regulator  41.56 
 
 		 189 aa  43.5  0.002  Mycobacterium sp. KMS  Bacteria  normal  1  hitchhiker  0.00000044097 
 
 
-
 
NC_008147  Mmcs_5597  TetR family transcriptional regulator  41.56 
 
 		 189 aa  43.5  0.002  Mycobacterium sp. MCS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_2059  TetR family transcriptional regulator  34.29 
 
 		 173 aa  42.4  0.005  Mycobacterium sp. KMS  Bacteria  normal  0.045167  normal  1 
 
 
-
 
NC_008146  Mmcs_2013  TetR family transcriptional regulator  34.29 
 
 		 173 aa  42.4  0.005  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_4031  DNA-binding transcriptional repressor FabR  29.82 
 
 		 199 aa  41.6  0.007  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.224768  n/a   
 
 
-
 
NC_013421  Pecwa_0195  DNA-binding transcriptional repressor FabR  43.1 
 
 		 213 aa  41.6  0.008  Pectobacterium wasabiae WPP163  Bacteria  normal  0.685771  n/a   
 
 
-
 
NC_009511  Swit_2297  TetR family transcriptional regulator  38.71 
 
 		 305 aa  41.2  0.01  Sphingomonas wittichii RW1  Bacteria  normal  0.0935054  hitchhiker  0.00257224 
 
 
-
 
NC_011312  VSAL_I0091  HTH-type transcriptional regulator, TetR family  33.33 
 
 		 199 aa  41.2  0.01  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.903201  n/a   
 
 
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