Gene YPK_4006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4006 
Symbol 
ID6091325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp4417957 
End bp4418643 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content49% 
IMG OID641599100 
ProductTetR family transcriptional regulator 
Protein accessionYP_001722722 
Protein GI170026217 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATACTC AGAATAAACA AGAAGGTTTC TCTCCATCGT TAACGACCAT TAGAGCCAGA 
ACCCGGCGGT TACTTATTGA TACCGCCATG TCGATGTATG AACGTGGTGC ATTCCCATCA 
ATCACCGAAG TCGCCAGTGC GGCTCAGCTT TCTCGTGCTA CTGCTTACCG TTACTTTCCG 
ACACAAAGCG CATTGGTTTC AGCCATGGTC GATGAGAGCC TCGGTCCAAT ATTGGCTTGG 
CAACCCACCC AACCGGATGC ACGGCAGCGT ATCGCCGAAT TATTGTCCTT TGCTTATCCG 
CGCATGTTGC AACATGAAGG CGTGTTACGT GCAGCGCTGC ACTTATCACT ACAGCAATGG 
GCTGATGCCC GCAGCAGTGA CAGTAATAAC AACAGCAATG ACAGTAATAA CAGCAGCAAT 
GAAGAAAAGT TAATCCGTGG GAACCGTAAA CGATTACTGA AATTGGCCGT CGAGCCACTG 
GAAGAGACGT TGGCACCAGA GGCCTTGCAA CGGGTGATCC ATGCCTTTTC ATTAATCTAT 
GGCTCTGAAG TTTTTATGGT GCTGAAAGAT ATTTGGCATC TGGACGAAGC GGGGATTCAG 
GATGTAACCC AGTGGATGGG CAAGGCCATT TTGTTGCAAG CTGAAACCGA TTCCCAACTG 
GCGGCTCAGG ACAAAACTCA TTCGTGA
 
Protein sequence
MNTQNKQEGF SPSLTTIRAR TRRLLIDTAM SMYERGAFPS ITEVASAAQL SRATAYRYFP 
TQSALVSAMV DESLGPILAW QPTQPDARQR IAELLSFAYP RMLQHEGVLR AALHLSLQQW 
ADARSSDSNN NSNDSNNSSN EEKLIRGNRK RLLKLAVEPL EETLAPEALQ RVIHAFSLIY 
GSEVFMVLKD IWHLDEAGIQ DVTQWMGKAI LLQAETDSQL AAQDKTHS