| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1922 |
|---|
| Symbol | |
|---|
| ID | 8225493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2358705 |
|---|
| End bp | 2359337 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644929765 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003086317 |
|---|
| Protein GI | 255035696 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0515657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.344284 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACA AAAATATAAA ATCCGGCAGG GTCAACCAGA AGTTGAAGAC TCAGAAGAAG
ATATTGGAAA CGGCAAGAGA GATGTTAGTT TCCAATAAGG ATTTCTCTCT CGACGACGTG
GCTGCCCAGA TGCAGATTTC CCGTGCAACC ATCTATAGAT ACTACGCCAA TATTGATATC
CTGTGTCTGG ATGTGGCTAT ATCGATGACC AATAAAGATC CAGAAGACTT CACCGAGTAC
GTCAGAGGAA TGACCCTAAG CCAGTCGCTT CTGTATGTGC AGGATTATTT TAACAATTTG
GTTCAGGAGC ACGAGAATCA ATTCCGCAAA TACCTGAGCC TGGTGCTGGA TAAATCAGTA
AAGGGTGAGT CGGCGATAGC TCATCGCGGG GGCAGGCGCC CTAGAACTTT GGAGATCGTC
ATGAAACCTT TTCAAACTGA ATTGGACGAC CAGACTTACA TTAATTTAAA AAACGTGGTG
ACCCTGCTCT GCGGAATTGA GCCTCTAATT TCCAATAAAG ATGTCAGCGG ATTGAATAAT
GAGCAGTCCA ACGAATTGCT AAAATGGGCC CTGGAAATGA TTCTTAGGGG TGTGGAGGCA
GATATGGCGG AAAAAACCAA CCCGACTCTA TGA
|
|---|
| Protein sequence | MNDKNIKSGR VNQKLKTQKK ILETAREMLV SNKDFSLDDV AAQMQISRAT IYRYYANIDI
LCLDVAISMT NKDPEDFTEY VRGMTLSQSL LYVQDYFNNL VQEHENQFRK YLSLVLDKSV
KGESAIAHRG GRRPRTLEIV MKPFQTELDD QTYINLKNVV TLLCGIEPLI SNKDVSGLNN
EQSNELLKWA LEMILRGVEA DMAEKTNPTL
|
|---|
| |