| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2789 |
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| Symbol | |
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| ID | 4080370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2951638 |
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| End bp | 2952249 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638011173 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_617827 |
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| Protein GI | 103488266 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.384058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGATTC GCACAAACCA GCGCCGCCGG ACGCGCAAGG ATCTGCTCGA GGCGGCGGCG
CGGCTGATCG ACGAAGGGCG GATGCCGACG CTCGAGGAAG TGGCCGCCGA AGCGCTCGTC
GCGCGCGCGA CCGCCTATCG CTATTTTCCG AACGTCGAGG CGTTGCTGCG CGAAGCCGCG
CTCGACATCG CCGTGCCCGA GCCCGCGACG CTCTTCGACG CTGCGGCGCC CGCAGACCCG
GTGGCGCGCG CGCAGCGCGT CGACACGGCG CTTCACGACA TGGTGTGCGC CAATGAATCG
GCGCTTCGGC TGATGCTCGC GCATACGCTC GAACGCAGCG CCACGCGCGA GAAGGCGAGC
AGTGTGCCGC TGCGACAGAA TCGCCGCGCA GCGCTGATTG ACGCGGCGCT CGAACCACTT
GCGGAGACAC TCGCCCCCGC CGCGCACGAC CGGCTGGCCA AGGCGCTCGG CCTGCTCGTC
GGAACCGAAG CCTTCATCGC CTGCAAGGAT GTGCTGCAAC TAGGCGATGC CGAAGCGCGC
GCGGTCAAGG CGTGGGCGAT CGGCGCGCTC GTCGAGGTGG CCATGAAACA GTCCCGGAGC
AAGAGCAAAT GA
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| Protein sequence | MGIRTNQRRR TRKDLLEAAA RLIDEGRMPT LEEVAAEALV ARATAYRYFP NVEALLREAA
LDIAVPEPAT LFDAAAPADP VARAQRVDTA LHDMVCANES ALRLMLAHTL ERSATREKAS
SVPLRQNRRA ALIDAALEPL AETLAPAAHD RLAKALGLLV GTEAFIACKD VLQLGDAEAR
AVKAWAIGAL VEVAMKQSRS KSK
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