Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2297 |
Symbol | |
ID | 5198361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2552936 |
End bp | 2553853 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640581843 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001262794 |
Protein GI | 148555212 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0935054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00257224 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCAATATA CGGTTCGGAC AAAATGGCTT CCGCCCGCCG AGAGCCCGGA TTTCCGACCG TTCCGGGTGG CGTTCGCATG GCCAATGGAC TACATCGTCA ATCCGAAAGG GCTCATTCCG ACCCTTTCGC CCATGGAGAG CATCATCTTG GAGGACGGAG CGCCGCGCCC GGAATCGAGC GAAGCCGCCA AGCCGGCCCG GCGCAAGGCG CGGACCGCCC CCCGCACGTC GCGGCTGAAC CCGGTCCAGC TCGCCCGCAG GGTCGAGGTG GGCGAGCAGC GGCGCGCCAA GTCGCGCAAC AAGCTGATGC AGGCGGCCTA CCGCCTGTTC GCCGTGCACG GCGCCGAAGC GCCGACGATC GACGACGTGA TCGCCGAGGC GAAGGTCGCG CGCGGCACCT TCTACAATCA TTTCAAGTCG CGCGACGAGC TGTTCCGCGC GGTCGGCAAC GACGTCTCCT TCGCGATCAA CTCGGTCATC TCGGGCGCGA TCGACGAGAT GGAGGACCCG ATCGAGCGGA TCATCCTCGC CTTCCGGCTG TTCATCCGCT TCGCGGTGTC CGATGCGGCG CGCGGCTGGA TCCTGCTGCG CACCATGCCG CTCGCCGGGC CGCTCAACGC CGGCGCCAAG GAGTTCATCG CCGCCGAGTT CGAGGCGGCG TTCGGGAGCG GCCGGCTGCG CGCGATGCCG ATGGCCGTCG CGATCGACAT GGGCCTGGGC ATGCAGATCA TGACGATCCA CCGGGTGCTG GTCGAGAAGG TCGGCAACGA CCATATCGAC CTCGCCGCCG GGGAGATGGC GGTGGCGCTG GGCCTCGACC CGGCCGAGGC GCGGGCGCTG GCCTCCATCC CGATCGAGGA GGACGATGCG CGGGCCGCGG CCGCGCGGGC CTATTCCTTC CCGGTGGAGA AGAGCTGA
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Protein sequence | MQYTVRTKWL PPAESPDFRP FRVAFAWPMD YIVNPKGLIP TLSPMESIIL EDGAPRPESS EAAKPARRKA RTAPRTSRLN PVQLARRVEV GEQRRAKSRN KLMQAAYRLF AVHGAEAPTI DDVIAEAKVA RGTFYNHFKS RDELFRAVGN DVSFAINSVI SGAIDEMEDP IERIILAFRL FIRFAVSDAA RGWILLRTMP LAGPLNAGAK EFIAAEFEAA FGSGRLRAMP MAVAIDMGLG MQIMTIHRVL VEKVGNDHID LAAGEMAVAL GLDPAEARAL ASIPIEEDDA RAAAARAYSF PVEKS
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