14 homologs were found in PanDaTox collection
for query gene Rfer_1585 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_1585  hypothetical protein  100 
 
 
405 aa  810    Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.000305006  n/a   
 
 
-
 
NC_007520  Tcr_0235  hypothetical protein  29.57 
 
 
486 aa  100  3e-20  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0416653  n/a   
 
 
-
 
NC_011992  Dtpsy_3452  hypothetical protein  31.42 
 
 
407 aa  99  1e-19  Acidovorax ebreus TPSY  Bacteria  normal  0.149809  n/a   
 
 
-
 
NC_007908  Rfer_1228  hypothetical protein  29.35 
 
 
524 aa  87.8  3e-16  Rhodoferax ferrireducens T118  Bacteria  normal  0.150843  n/a   
 
 
-
 
NC_012791  Vapar_2832  hypothetical protein  27.09 
 
 
465 aa  79  0.0000000000001  Variovorax paradoxus S110  Bacteria  normal  0.907997  n/a   
 
 
-
 
NC_007517  Gmet_2185  fibronectin, type III  29.15 
 
 
656 aa  62  0.00000002  Geobacter metallireducens GS-15  Bacteria  normal  0.0292079  hitchhiker  0.000132126 
 
 
-
 
NC_009483  Gura_0706  hypothetical protein  28.92 
 
 
553 aa  56.6  0.0000008  Geobacter uraniireducens Rf4  Bacteria  normal  0.31357  n/a   
 
 
-
 
NC_008740  Maqu_3016  hypothetical protein  29.17 
 
 
500 aa  53.1  0.000008  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0938  hypothetical protein  30.41 
 
 
418 aa  50.8  0.00004  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011992  Dtpsy_3361  hypothetical protein  28.66 
 
 
466 aa  50.1  0.00006  Acidovorax ebreus TPSY  Bacteria  normal  0.623188  n/a   
 
 
-
 
NC_010506  Swoo_3012  lipoprotein  27.01 
 
 
437 aa  45.8  0.001  Shewanella woodyi ATCC 51908  Bacteria  normal  0.214836  normal  0.364321 
 
 
-
 
NC_010524  Lcho_2573  hypothetical protein  30.72 
 
 
523 aa  45.1  0.002  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000703418 
 
 
-
 
NC_010725  Mpop_0840  conserved hypothetical protein; putative signal peptide  32.35 
 
 
445 aa  45.1  0.003  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_0201  hypothetical protein  40.24 
 
 
429 aa  44.3  0.004  Acidiphilium cryptum JF-5  Bacteria  normal  0.640363  n/a   
 
 
-
 
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