Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1585 |
Symbol | |
ID | 3960922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1716607 |
End bp | 1717824 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637916409 |
Product | hypothetical protein |
Protein accession | YP_522848 |
Protein GI | 89900377 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000305006 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGAAC ATCAACCACA GGACTCATCT CTGACACGGC GCCACTGGCT GGTGCTGGCA GCGTCGGCCG TGAGCGGATG CGGTGGCGGC AGCACCAGCA CCACGGCGAG CCTGTCACCA GGCACTGGCG GCACCGGCGT TGTCTATACG CAAGGTTCTA TTTCCGGCTT TGGCAGTGTG ATCGTGAACG GTATCAAGTT TGACGATCTG CAGGCCACGG TACAGATGGA CGGTGGACCG GCTGAATCCA GCAATCTGCG CGTGGGCATG GTGGTCGCTG TGCAAGGCAC ACGCCTGGCC GACCCCACCC TGGGCACGGC CAGCCACATC GAGGTCTGGT CGATTGCGCA AGGCCCGGTG CTGCAAGGAC CGACCGTGAC GCAGAATTCC CAGCGTGCGG ATGGCTCCGT CGCCGAGTTT GCCGAGTTCT CCGTGGCGGG CATGACGGTG CAAACCAACC CCGACACCTC GTTTTACGGC GTTGCTCTGG CGTCGGACCT GCTACCCAAC CAGGCGGTGA CGGTGTGGGG CCTGCAGGCA GGCGCGGATG GCACCCGCTG GACGGCCACT TATGTCGAGG TGCGCCCGAT GGGCATGGAC ATGGTCAGCA CCGGCGTGGT CCACGTGGCG GGCTTGCAGC GCTCACTCAA CGGCTTGCTG CTCGCGGGTT CGATGGCCGA CACGCTGGTT GACGGATCGT TGGTGCGGGT TCAGGGTGTC TGGTCTGATG CCAGTAACAG TCTGGCGGTG GCGCACGCCA AGTTGCTGGG CTCCGGGCTG CTTGGCCAAC TGCCCGACGA GGCCAAGATC GAGGTCGAAA TTGAAGGCTT CGTGACCGAC ACGCCGACGG CCAGCGGCTT CATGCTGGGC AACATCGTGG TGGACGCCAG CGCCATTGCC CCCATCAGTA CACAGATCAA AGAGGGAGCT CGGGTGGAGG TGTATGGCAC CTGGCAGTCA GGCGTGCTCA AAGCCACCGA AGTCGAACTT GAAAACGAGC AGACTCTGCA AACGGTCGAG CTCAAGGGCG TGATCGAGGT ATTTACCAGC AAGGCGGAAT TTTGGGTGCG GGGGCAGCGC TGTGATGCCT CGGGTATTGC CAAGGTCGAG CACGGCACGC TGGCTGATCT GAAACAGGGG GTTGAGGTCA AGCTCAAGGG CAGCAAGGCC GGCGACGTGG TGATGGTGAC TGAGCTGGAA ATAGTCGTGA ACGACTGA
|
Protein sequence | MSEHQPQDSS LTRRHWLVLA ASAVSGCGGG STSTTASLSP GTGGTGVVYT QGSISGFGSV IVNGIKFDDL QATVQMDGGP AESSNLRVGM VVAVQGTRLA DPTLGTASHI EVWSIAQGPV LQGPTVTQNS QRADGSVAEF AEFSVAGMTV QTNPDTSFYG VALASDLLPN QAVTVWGLQA GADGTRWTAT YVEVRPMGMD MVSTGVVHVA GLQRSLNGLL LAGSMADTLV DGSLVRVQGV WSDASNSLAV AHAKLLGSGL LGQLPDEAKI EVEIEGFVTD TPTASGFMLG NIVVDASAIA PISTQIKEGA RVEVYGTWQS GVLKATEVEL ENEQTLQTVE LKGVIEVFTS KAEFWVRGQR CDASGIAKVE HGTLADLKQG VEVKLKGSKA GDVVMVTELE IVVND
|
| |