9 homologs were found in PanDaTox collection
for query gene Lcho_0938 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_0938  hypothetical protein  100 
 
 		 418 aa  821    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_011992  Dtpsy_3452  hypothetical protein  32.52 
 
 		 407 aa  106  1e-21  Acidovorax ebreus TPSY  Bacteria  normal  0.149809  n/a   
 
 
-
 
NC_007908  Rfer_1585  hypothetical protein  31.96 
 
 		 405 aa  67  0.0000000007  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.000305006  n/a   
 
 
-
 
NC_007908  Rfer_1228  hypothetical protein  29.2 
 
 		 524 aa  63.2  0.000000009  Rhodoferax ferrireducens T118  Bacteria  normal  0.150843  n/a   
 
 
-
 
NC_010524  Lcho_2573  hypothetical protein  35.47 
 
 		 523 aa  55.1  0.000002  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000703418 
 
 
-
 
NC_007520  Tcr_0235  hypothetical protein  25.23 
 
 		 486 aa  54.7  0.000003  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0416653  n/a   
 
 
-
 
NC_007517  Gmet_2185  fibronectin, type III  30.82 
 
 		 656 aa  53.5  0.000006  Geobacter metallireducens GS-15  Bacteria  normal  0.0292079  hitchhiker  0.000132126 
 
 
-
 
NC_012791  Vapar_2832  hypothetical protein  34.67 
 
 		 465 aa  53.1  0.000009  Variovorax paradoxus S110  Bacteria  normal  0.907997  n/a   
 
 
-
 
NC_008740  Maqu_3016  hypothetical protein  26.82 
 
 		 500 aa  47  0.0007  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
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