Gene Gmet_2185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2185 
Symbol 
ID3739977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2471456 
End bp2473426 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content63% 
IMG OID637779478 
Productfibronectin, type III 
Protein accessionYP_385138 
Protein GI78223391 
COG category[R] General function prediction only 
COG ID[COG3401] Fibronectin type 3 domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0292079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.000132126 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAAGAC GATTGTTGTA CCAGGTGTTT GTCGCCGCAT TCATGATGGT GTGGGTGATG 
GTCATGGCAG GTTGCGGAGG AGGGGGCGGC GGTTCGGCGC CGGTCGCCAG CCAGGGGGTA
AGCAAAGGGA CCATTACCAA GCTGGGGAGC ATTTTTGTCA ACGGGGTGGA ATACGACACC
ACTGGCCTCA CCCCCGACAT GGAAAATCCC GGTGACGTGG CCGGAGGGCT CAAGGTAGGG
ATGGTCGTCA CGGTTATGGG GACATTCAGC GACAGTACCC ACGCCAAGGC GACCTATGTC
AAGTTTTCCG ATACCCTCGA GGGGCCGATC GCGGCAGTGG ACAGCGTTGC GAAAACCATG
ACGGTTCTGG GGCAGAACAT CACGTTCGAT TCGGCAACGG TGTTCGACGA TTTCAACAGC
GCCCCCATGC CGGGACAAAT GGTCCAGGTA AGCGGCTACG CGGATGCCAG CGGCACGATC
AAGGCAACCC GCATCGAGCG GCATCTCCCC GACTGGACAC CGACCACGGT TGTTGAGATG
AAAGGGACCA TCACCGCCAT GCCGACGGCC ACCAGCTTCG CCATCGGCGG CCTGACCGTT
GACGCAACCG GCATCACCCT CCCGGCCGGC ACCGCCGTTG GGTCGTTCGT CAAGGTCGAG
GGGACCATGA CGGCTGCCAC CGCCACTACC CTCAAGGCGA CCAGCGTTTC CTCCCGCAAA
GAGGGGGTCG AGGTCGACGA TAACCACAAA GGGCACGTGG ATGTCGAGGG CTTTGTCCAG
AATCTTACCG GCAATACGTT CACGGTGGCA GGCACGAAGG TTAACGCGGG CAATCTTTCC
CTTGCCGGGA TCGCCAACGG CGTCAAGGTG GAAGTGGAAG GCACCGTTGT CAACGGCGTA
CTGAATGCCA CGAAGATCTC GATTGAAGGG GCAGCGCCTC CGGCGGCCGT TCCGTCAGCT
CCCACGGCAA CCGCCGCCGC CGGTTCCGGG CAGGTAACCA TCTCCTGGGG CGCCGTGTCC
AGTGCCACGT CGTACAATAT CTACTGGGCC ACGACCACGG GCGTTACCCC GGCAACGGGG
ACCAAGATCG CCAATGTCAA TTCTCCCTAC ACCCAGACCG GTCTCACCAA CGGCACCACC
TACTTCTACG TCGTGACCGC GGTTAACGCC GTTGGCGAGA GCGCCCCGTC GGGCCAGGTT
TCGGCCACTC CTTCCGCCGT CGCGACCGTG CCGGCTGCTC CCGTTGCAAG TGCCGCCGCT
GGTGCCAATC AGGTGACCAT CACCTGGCCT GCCGTCACCG GTGCCACCTC GTACAACCTG
TACTGGTCCA CGACCACGGG CGTTACCCCG GCTAACGGGA CCCTGATCGC CGGCGTTACC
TCTCCCTACG TCCAGACCGC CCTGACCAAC GGCACCACCT ACTTCTACGT CGTGACTGCG
GTCAATGCCG TCGGCGAAAG CGCCCCGTCG GCCCAGGTTT CGGCCACTCC CGCCGCCGCG
GTGACCGTGC CGGCCGCTCC CGTTGCGACT GCCACGGGCG GCGCCAATCA GGTAACCATC
ACCTGGCCGG CCGTTACCGG CGCAACCTCG TACAACCTGT ACTGGTCCAC CACCACGGGC
GTTACCCCGG CCAACGGGAC CCTGATCGCC AACGCCACCT CTCCCTATGT TCAGACCGGT
CTGACCGCAT CCACCACCTA TTTCTACGTG GTCACCGCCA TGAACGCTGC CGGCACCAGC
GCCCCGTCGG CCCAGGTTTC GGCCATGACA TCGGCTCCGG CCCTGGACGG CGCGGCACTG
TATGCAGCCA ACTGTGCCGG CTGCCACAAC CCGTTGGCGA CGTCGACCAA GAGGATGAGA
ACCGCAGCCC AGATTCAGGC TGCAATCAAT AACAACGTTG GCGGCATGGG CTTCCTGTCG
ACCCTGACTG CTGCCCAGGT TCAAGCCATT GCCACAGCCC TGAACTTCTG A
 
Protein sequence
MRRRLLYQVF VAAFMMVWVM VMAGCGGGGG GSAPVASQGV SKGTITKLGS IFVNGVEYDT 
TGLTPDMENP GDVAGGLKVG MVVTVMGTFS DSTHAKATYV KFSDTLEGPI AAVDSVAKTM
TVLGQNITFD SATVFDDFNS APMPGQMVQV SGYADASGTI KATRIERHLP DWTPTTVVEM
KGTITAMPTA TSFAIGGLTV DATGITLPAG TAVGSFVKVE GTMTAATATT LKATSVSSRK
EGVEVDDNHK GHVDVEGFVQ NLTGNTFTVA GTKVNAGNLS LAGIANGVKV EVEGTVVNGV
LNATKISIEG AAPPAAVPSA PTATAAAGSG QVTISWGAVS SATSYNIYWA TTTGVTPATG
TKIANVNSPY TQTGLTNGTT YFYVVTAVNA VGESAPSGQV SATPSAVATV PAAPVASAAA
GANQVTITWP AVTGATSYNL YWSTTTGVTP ANGTLIAGVT SPYVQTALTN GTTYFYVVTA
VNAVGESAPS AQVSATPAAA VTVPAAPVAT ATGGANQVTI TWPAVTGATS YNLYWSTTTG
VTPANGTLIA NATSPYVQTG LTASTTYFYV VTAMNAAGTS APSAQVSAMT SAPALDGAAL
YAANCAGCHN PLATSTKRMR TAAQIQAAIN NNVGGMGFLS TLTAAQVQAI ATALNF