Gene Rfer_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1228 
Symbol 
ID3961218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1317485 
End bp1319059 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content60% 
IMG OID637916042 
Producthypothetical protein 
Protein accessionYP_522493 
Protein GI89900022 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.150843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAA TTAAACCAAG TTTTCGCTGG ACCCTATTGA CCCTGTCCAG TGCCATGCTG 
CTGACAGCTT GCGGCGGCGG CGGTGGCACC ACCCCGGCTG TCAACAACAC CGCGCCCGCA
GCGGCCATGT ATGCCGGACC GATCACCGGT TTTGGCTCGG TCATCGTGAA CGGCATGCGC
TTCTCATCGG TGGGTGCCAC GCTGCAGGAT GATGACGGCC AGGACATCAA TCTGGATCAA
CTCAAACTGG GTATGACGGT GCGCGTGAGT GGTACTGCCG ACGACAGCAC CCAGCTGGGC
ACGGCCAGCC AATTGGCCTT GGTGCATGGC ATCCGGGGCG CAATCACAAC CGTGAATGCA
TCGGCCAACA CACTCACCTT GCTGGGGCAA ACGGTGAACA CCAACACAGC CACCGCTTAC
CAGGGTGTGA GCGGACTGGC CGGACTGACG GCCGGGCAAT CGGTGGAGGT GTACGGCGCC
TTGCAGGCCG ACGGCAGCTT GCTGGCAACC CTCATCCAGC TCAAGACAAC AGCATTCACC
ACACTGAGCG TGAACGGCGT GGTGGGCAAC CTGAGCGCCA CCAGCTTCAA GGTGGGCAAC
CTGACGGTGA ACTACAGCAC GGCGGTGGTC ACCGGGGTGC TGGGCGACGG CAAGCGGGTG
AAGATCAAGG CGGTCGCCAG CAATTTTGAC GCGGTCAACA ATGTGCTGAC GGCCAGCACG
GTAAAAGTCG AGGAAGCGAG CTCGGTGTAT GGCGCCACAG TGGCGGCAGG CGCCTGGCTG
AAGATCAAGG GCATCGCCGA TGCGGCACCC ATCAATGGCG TGTTGAAGGT CTCGGGTACG
CCGGTGAATA TGTCACAGGC AGCGATCAAG GGCAACACCA GCACCATCAC AGCGGGTCAG
CTGCTTGAGG TCAAAGGCAA CTGGGACGGC AGTGTGTTGC AGGCCACACA GATTGAACAG
GACGGCTACC GTGCCGGCCA GATTGGCGGC AGCAACGAGC TGTATGGCGC TGTCAGCAGC
ATCAATGGCA GCACCGTGGT CGTTAATGGT GTCAGTGTTG ACTTGAGCAC TGCGACGTTC
GGGCGTAGCG CCACCTTGGC CCAAGTGGCG GTCGGCAGTT ATGTCGAGAT CAAGGGAAAC
TTGTCGGGCA ACCTGCTGCG GGCGACCAAA GTCGAGCTCA AGACCAATGG CACCGGCAGC
ACCGGTAGCA GCGCCAGTAC TGATGGTAGC CACGGCAACG ACAACAGCAA CGATAGCAGC
CACGGCAATG ACAACACCAG TAGCGATAGC AGCCACAGCA ACGACAACAA CACCAGCAAC
GATAGCAGCC ACGGAACGGT TGGCGATGTG AGCTATGAGC AATACGGTCA GGTGTCGGAC
TTTGCGTCTG TGGCCAGTTT CAAGCTCAAC GGCTTGACGG TCGATGCCTC TGCGGCCCGT
TTCGAACACA CGAATGCGGC CAGCCTGGCC AACGGGGTTT ATGTGGAAAT CAAGGGCACC
CAAGGCAGCA ACGGCGTGTT CGTCGCCACC AAGGTGGACA TCAAGAACCA CAGCAATCAC
GACAGCAATG ACTGA
 
Protein sequence
MNQIKPSFRW TLLTLSSAML LTACGGGGGT TPAVNNTAPA AAMYAGPITG FGSVIVNGMR 
FSSVGATLQD DDGQDINLDQ LKLGMTVRVS GTADDSTQLG TASQLALVHG IRGAITTVNA
SANTLTLLGQ TVNTNTATAY QGVSGLAGLT AGQSVEVYGA LQADGSLLAT LIQLKTTAFT
TLSVNGVVGN LSATSFKVGN LTVNYSTAVV TGVLGDGKRV KIKAVASNFD AVNNVLTAST
VKVEEASSVY GATVAAGAWL KIKGIADAAP INGVLKVSGT PVNMSQAAIK GNTSTITAGQ
LLEVKGNWDG SVLQATQIEQ DGYRAGQIGG SNELYGAVSS INGSTVVVNG VSVDLSTATF
GRSATLAQVA VGSYVEIKGN LSGNLLRATK VELKTNGTGS TGSSASTDGS HGNDNSNDSS
HGNDNTSSDS SHSNDNNTSN DSSHGTVGDV SYEQYGQVSD FASVASFKLN GLTVDASAAR
FEHTNAASLA NGVYVEIKGT QGSNGVFVAT KVDIKNHSNH DSND