10 homologs were found in PanDaTox collection
for query gene Lcho_2573 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_2573  hypothetical protein  100 
 
 		 523 aa  1027    Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000703418 
 
 
-
 
NC_007908  Rfer_1228  hypothetical protein  29.14 
 
 		 524 aa  71.6  0.00000000003  Rhodoferax ferrireducens T118  Bacteria  normal  0.150843  n/a   
 
 
-
 
NC_011992  Dtpsy_3452  hypothetical protein  28.47 
 
 		 407 aa  69.3  0.0000000002  Acidovorax ebreus TPSY  Bacteria  normal  0.149809  n/a   
 
 
-
 
NC_011992  Dtpsy_3361  hypothetical protein  30.64 
 
 		 466 aa  63.5  0.000000008  Acidovorax ebreus TPSY  Bacteria  normal  0.623188  n/a   
 
 
-
 
NC_008782  Ajs_4011  hypothetical protein  29.69 
 
 		 390 aa  61.2  0.00000004  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_0706  hypothetical protein  33.67 
 
 		 553 aa  60.8  0.00000006  Geobacter uraniireducens Rf4  Bacteria  normal  0.31357  n/a   
 
 
-
 
NC_010524  Lcho_0938  hypothetical protein  31.37 
 
 		 418 aa  57.4  0.0000006  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007908  Rfer_1585  hypothetical protein  31.35 
 
 		 405 aa  52.8  0.00002  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.000305006  n/a   
 
 
-
 
NC_007520  Tcr_0235  hypothetical protein  30.23 
 
 		 486 aa  52  0.00003  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0416653  n/a   
 
 
-
 
NC_007517  Gmet_2185  fibronectin, type III  29.29 
 
 		 656 aa  46.2  0.002  Geobacter metallireducens GS-15  Bacteria  normal  0.0292079  hitchhiker  0.000132126 
 
 
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