More than 300 homologs were found in PanDaTox collection
for query gene PXO_04878 on replicon NC_010717
Organism: Xanthomonas oryzae pv. oryzae PXO99A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010717  PXO_04878  succinyl-CoA synthetase subunit alpha  100 
 
 
291 aa  577  1e-164  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.917375  n/a   
 
 
-
 
NC_011071  Smal_3163  succinyl-CoA synthetase subunit alpha  95.88 
 
 
291 aa  534  1e-151  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.608891  normal 
 
 
-
 
NC_010577  XfasM23_2038  succinyl-CoA synthetase subunit alpha  90.03 
 
 
290 aa  498  1e-140  Xylella fastidiosa M23  Bacteria  normal  0.211193  n/a   
 
 
-
 
NC_010513  Xfasm12_2118  succinyl-CoA synthetase subunit alpha  90.03 
 
 
290 aa  499  1e-140  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2548  succinyl-CoA synthetase (ADP-forming) alpha subunit  75.09 
 
 
290 aa  441  1e-123  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.12229 
 
 
-
 
NC_011901  Tgr7_0810  succinyl-CoA synthetase, alpha subunit  73.79 
 
 
288 aa  442  1e-123  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.674167  n/a   
 
 
-
 
NC_009436  Ent638_1229  succinyl-CoA synthetase subunit alpha  74.23 
 
 
289 aa  434  1e-121  Enterobacter sp. 638  Bacteria  normal  normal  0.143875 
 
 
-
 
NC_011080  SNSL254_A0798  succinyl-CoA synthetase subunit alpha  74.57 
 
 
289 aa  436  1e-121  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0283915  normal  0.188512 
 
 
-
 
NC_011149  SeAg_B0772  succinyl-CoA synthetase subunit alpha  74.57 
 
 
289 aa  436  1e-121  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A0895  succinyl-CoA synthetase subunit alpha  74.57 
 
 
289 aa  436  1e-121  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.0404555  normal 
 
 
-
 
NC_011083  SeHA_C0862  succinyl-CoA synthetase subunit alpha  74.57 
 
 
289 aa  436  1e-121  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.0472557 
 
 
-
 
NC_011205  SeD_A0833  succinyl-CoA synthetase subunit alpha  74.23 
 
 
289 aa  435  1e-121  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0260305  normal 
 
 
-
 
NC_007520  Tcr_1373  succinyl-CoA synthetase, alpha subunit  72.45 
 
 
293 aa  432  1e-120  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1239  succinyl-CoA synthetase subunit alpha  73.45 
 
 
290 aa  431  1e-120  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.961959  n/a   
 
 
-
 
NC_010159  YpAngola_A1387  succinyl-CoA synthetase subunit alpha  72.76 
 
 
290 aa  429  1e-119  Yersinia pestis Angola  Bacteria  normal  0.341558  normal 
 
 
-
 
NC_002947  PP_4185  succinyl-CoA synthetase subunit alpha  74.05 
 
 
294 aa  429  1e-119  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_3097  succinyl-CoA synthetase subunit alpha  73.45 
 
 
290 aa  430  1e-119  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3508  succinyl-CoA synthetase subunit alpha  74.05 
 
 
294 aa  429  1e-119  Pseudomonas putida W619  Bacteria  normal  0.214073  normal  0.671935 
 
 
-
 
NC_009708  YpsIP31758_2878  succinyl-CoA synthetase subunit alpha  72.76 
 
 
290 aa  429  1e-119  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_1669  succinyl-CoA synthetase subunit alpha  74.05 
 
 
294 aa  429  1e-119  Pseudomonas putida F1  Bacteria  normal  0.212959  normal 
 
 
-
 
NC_010465  YPK_2965  succinyl-CoA synthetase subunit alpha  72.76 
 
 
290 aa  429  1e-119  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1270  succinyl-CoA synthetase, alpha subunit  73.45 
 
 
290 aa  428  1e-119  Serratia proteamaculans 568  Bacteria  normal  0.531627  hitchhiker  0.00241286 
 
 
-
 
NC_010322  PputGB1_3756  succinyl-CoA synthetase subunit alpha  74.05 
 
 
294 aa  429  1e-119  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2203  succinyl-CoA synthase, alpha subunit  73.01 
 
 
293 aa  425  1e-118  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0467601  n/a   
 
 
-
 
NC_006368  lpp0600  succinyl-CoA synthetase, alpha subunit  71.97 
 
 
291 aa  426  1e-118  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl0581  succinyl-CoA synthetase, alpha subunit  71.97 
 
 
291 aa  426  1e-118  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_012912  Dd1591_2911  succinyl-CoA synthetase subunit alpha  72.76 
 
 
290 aa  427  1e-118  Dickeya zeae Ech1591  Bacteria  normal  0.861372  n/a   
 
 
-
 
CP001509  ECD_00688  succinyl-CoA synthetase subunit alpha  72.16 
 
 
289 aa  424  1e-117  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2907  succinyl-CoA synthetase, alpha subunit  72.16 
 
 
289 aa  424  1e-117  Escherichia coli DH1  Bacteria  normal  0.398696  n/a   
 
 
-
 
NC_010658  SbBS512_E0648  succinyl-CoA synthetase subunit alpha  72.16 
 
 
289 aa  424  1e-117  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2013  succinyl-CoA synthetase subunit alpha  73.01 
 
 
293 aa  424  1e-117  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.143561  normal  0.801568 
 
 
-
 
NC_011353  ECH74115_0821  succinyl-CoA synthetase subunit alpha  72.16 
 
 
289 aa  424  1e-117  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_0755  succinyl-CoA synthetase subunit alpha  72.16 
 
 
289 aa  424  1e-117  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1618  succinyl-CoA synthetase subunit alpha  73.01 
 
 
294 aa  422  1e-117  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.161145  normal  0.222045 
 
 
-
 
NC_012892  B21_00677  hypothetical protein  72.16 
 
 
289 aa  424  1e-117  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0776  succinyl-CoA synthetase subunit alpha  72.16 
 
 
289 aa  424  1e-117  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3685  succinyl-CoA synthetase subunit alpha  73.01 
 
 
295 aa  422  1e-117  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2927  succinyl-CoA synthetase subunit alpha  72.16 
 
 
289 aa  424  1e-117  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1147  succinyl-CoA synthetase subunit alpha  71.48 
 
 
290 aa  423  1e-117  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0741  succinyl-CoA synthetase subunit alpha  72.16 
 
 
289 aa  424  1e-117  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_1989  succinyl-CoA synthetase, alpha subunit  70 
 
 
295 aa  421  1e-117  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_43940  succinyl-CoA synthetase subunit alpha  73.01 
 
 
295 aa  422  1e-117  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_1430  succinyl-CoA synthetase alpha chain  73.78 
 
 
290 aa  422  1e-117  Shewanella amazonensis SB2B  Bacteria  normal  0.204322  normal 
 
 
-
 
NC_009439  Pmen_2499  succinyl-CoA synthetase subunit alpha  71.63 
 
 
295 aa  419  1e-116  Pseudomonas mendocina ymp  Bacteria  normal  0.285546  normal  0.123009 
 
 
-
 
NC_009997  Sbal195_2625  succinyl-CoA synthetase, alpha subunit  73.08 
 
 
290 aa  419  1e-116  Shewanella baltica OS195  Bacteria  hitchhiker  0.0000598296  normal  0.140223 
 
 
-
 
NC_011663  Sbal223_1839  succinyl-CoA synthetase, alpha subunit  73.08 
 
 
290 aa  419  1e-116  Shewanella baltica OS223  Bacteria  hitchhiker  0.00249209  normal  0.0388751 
 
 
-
 
NC_009665  Shew185_2505  succinyl-CoA synthetase, alpha subunit  73.08 
 
 
290 aa  419  1e-116  Shewanella baltica OS185  Bacteria  hitchhiker  0.00526313  n/a   
 
 
-
 
NC_008228  Patl_1802  succinyl-CoA synthetase, alpha subunit  71.63 
 
 
290 aa  419  1e-116  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.155061  n/a   
 
 
-
 
NC_009052  Sbal_2512  succinyl-CoA synthetase, alpha subunit  73.08 
 
 
290 aa  419  1e-116  Shewanella baltica OS155  Bacteria  normal  0.498228  n/a   
 
 
-
 
NC_003910  CPS_2222  succinyl-CoA synthase, alpha subunit  72.38 
 
 
290 aa  415  9.999999999999999e-116  Colwellia psychrerythraea 34H  Bacteria  normal  0.0851667  n/a   
 
 
-
 
NC_004347  SO_1933  succinyl-CoA synthase, alpha subunit  72.22 
 
 
290 aa  416  9.999999999999999e-116  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009719  Plav_1453  succinyl-CoA synthetase subunit alpha  69.52 
 
 
291 aa  414  9.999999999999999e-116  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.33077  normal 
 
 
-
 
NC_007484  Noc_0714  succinyl-CoA ligase, alpha subunit  70.28 
 
 
291 aa  414  9.999999999999999e-116  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.0000108729  n/a   
 
 
-
 
NC_009438  Sputcn32_2266  succinyl-CoA synthetase, alpha subunit  72.57 
 
 
290 aa  417  9.999999999999999e-116  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2796  succinyl-CoA synthetase, alpha subunit  70.93 
 
 
290 aa  415  9.999999999999999e-116  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.623771 
 
 
-
 
NC_007912  Sde_2102  succinyl-CoA synthetase (ADP-forming) alpha subunit  70.93 
 
 
290 aa  417  9.999999999999999e-116  Saccharophagus degradans 2-40  Bacteria  normal  0.174971  normal 
 
 
-
 
NC_007954  Sden_2180  succinyl-CoA synthetase, alpha subunit  72.03 
 
 
290 aa  417  9.999999999999999e-116  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0115  succinyl-CoA synthetase, alpha subunit  70.63 
 
 
291 aa  416  9.999999999999999e-116  Psychrobacter cryohalolentis K5  Bacteria  normal  0.732037  normal 
 
 
-
 
NC_009092  Shew_1658  succinyl-CoA synthetase, alpha subunit  72.22 
 
 
290 aa  417  9.999999999999999e-116  Shewanella loihica PV-4  Bacteria  normal  0.0294249  normal  0.471073 
 
 
-
 
NC_008321  Shewmr4_1638  succinyl-CoA synthetase (ADP-forming) alpha subunit  72.22 
 
 
290 aa  414  9.999999999999999e-116  Shewanella sp. MR-4  Bacteria  normal  0.0190398  normal 
 
 
-
 
NC_008322  Shewmr7_1713  succinyl-CoA synthetase (ADP-forming) alpha subunit  72.22 
 
 
290 aa  414  9.999999999999999e-116  Shewanella sp. MR-7  Bacteria  normal  0.0303591  normal 
 
 
-
 
NC_009524  PsycPRwf_0270  succinyl-CoA synthetase, alpha subunit  68.88 
 
 
291 aa  414  9.999999999999999e-116  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1713  succinyl-CoA synthetase (ADP-forming) alpha subunit  72.22 
 
 
290 aa  414  9.999999999999999e-116  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0092181  normal  0.0855349 
 
 
-
 
NC_012560  Avin_29730  Succinyl-CoA ligase, alpha subunit  69.9 
 
 
295 aa  414  9.999999999999999e-116  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0849  succinyl-CoA synthetase subunit alpha  71.72 
 
 
290 aa  412  1e-114  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_0106  succinyl-CoA synthetase (ADP-forming) alpha subunit  70.63 
 
 
291 aa  414  1e-114  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_2039  succinyl-CoA synthetase, alpha subunit  68.53 
 
 
291 aa  412  1e-114  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1791  succinyl-CoA synthetase, alpha subunit  72.03 
 
 
290 aa  413  1e-114  Shewanella pealeana ATCC 700345  Bacteria  normal  0.66969  n/a   
 
 
-
 
NC_008789  Hhal_2239  succinyl-CoA synthetase, alpha subunit  73.1 
 
 
290 aa  411  1e-114  Halorhodospira halophila SL1  Bacteria  normal  0.0272421  n/a   
 
 
-
 
NC_010506  Swoo_1840  succinyl-CoA synthetase, alpha subunit  71.68 
 
 
290 aa  414  1e-114  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00135274  normal  0.0561968 
 
 
-
 
NC_007947  Mfla_1888  succinyl-CoA synthetase (ADP-forming) alpha subunit  69.42 
 
 
292 aa  412  1e-114  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1221  succinyl-CoA synthetase (ADP-forming) alpha subunit  71.53 
 
 
290 aa  413  1e-114  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2811  succinyl-CoA synthetase, alpha subunit  70.98 
 
 
290 aa  410  1e-113  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01878  Succinyl-CoA synthetase, alpha subunit  70.98 
 
 
290 aa  410  1e-113  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1158  succinyl-CoA synthetase, alpha subunit  70.28 
 
 
290 aa  408  1e-113  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01358  succinyl-CoA synthetase subunit alpha  70.98 
 
 
290 aa  404  1.0000000000000001e-112  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A1670  succinyl-CoA synthetase subunit alpha  70.98 
 
 
290 aa  406  1.0000000000000001e-112  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_004109  succinyl-CoA ligase [ADP-forming] alpha chain  71.33 
 
 
290 aa  406  1.0000000000000001e-112  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_0598  succinyl-CoA synthetase alpha chain  66.2 
 
 
294 aa  407  1.0000000000000001e-112  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1556  succinate-CoA ligase (ADP-forming), alpha subunit  65.85 
 
 
294 aa  403  1e-111  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_0956  succinyl-CoA synthetase (ADP-forming) alpha subunit  68.28 
 
 
290 aa  403  1e-111  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2340  succinyl-CoA synthetase, alpha subunit  72.73 
 
 
290 aa  403  1e-111  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.516028  n/a   
 
 
-
 
NC_008709  Ping_2249  succinyl-CoA synthetase, alpha subunit  70.28 
 
 
290 aa  401  1e-111  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.634912 
 
 
-
 
NC_002977  MCA0968  succinyl-CoA synthase, alpha subunit  71.13 
 
 
290 aa  399  9.999999999999999e-111  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1376  succinyl-CoA synthetase, alpha subunit  65.29 
 
 
299 aa  397  1e-109  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007984  BCI_0098  succinyl-CoA synthetase, alpha subunit  65.86 
 
 
294 aa  396  1e-109  Baumannia cicadellinicola str. Hc (Homalodisca coagulata)  Bacteria  normal  0.126064  n/a   
 
 
-
 
NC_011773  BCAH820_3847  succinyl-CoA synthetase subunit alpha  66.32 
 
 
300 aa  392  1e-108  Bacillus cereus AH820  Bacteria  n/a    unclonable  8.48753e-62 
 
 
-
 
NC_011725  BCB4264_A3933  succinyl-CoA synthetase subunit alpha  66.32 
 
 
300 aa  392  1e-108  Bacillus cereus B4264  Bacteria  hitchhiker  0.000608067  n/a   
 
 
-
 
NC_003909  BCE_3877  succinyl-CoA synthetase subunit alpha  66.32 
 
 
300 aa  392  1e-108  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000526587  n/a   
 
 
-
 
NC_005945  BAS3686  succinyl-CoA synthetase subunit alpha  66.32 
 
 
300 aa  392  1e-108  Bacillus anthracis str. Sterne  Bacteria  normal  0.0387134  n/a   
 
 
-
 
NC_005957  BT9727_3576  succinyl-CoA synthetase subunit alpha  66.32 
 
 
300 aa  392  1e-108  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0154825  n/a   
 
 
-
 
NC_006274  BCZK3594  succinyl-CoA synthetase subunit alpha  66.32 
 
 
300 aa  392  1e-108  Bacillus cereus E33L  Bacteria  normal  0.372712  n/a   
 
 
-
 
NC_011658  BCAH187_A3882  succinyl-CoA synthetase subunit alpha  66.32 
 
 
300 aa  392  1e-108  Bacillus cereus AH187  Bacteria  hitchhiker  0.000000124479  n/a   
 
 
-
 
NC_007530  GBAA_3973  succinyl-CoA synthetase subunit alpha  66.32 
 
 
300 aa  392  1e-108  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00161204  n/a   
 
 
-
 
NC_010623  Bphy_4692  succinyl-CoA synthetase, alpha subunit  72.22 
 
 
278 aa  392  1e-108  Burkholderia phymatum STM815  Bacteria  normal  0.243539  normal  0.0624727 
 
 
-
 
NC_011772  BCG9842_B1310  succinyl-CoA synthetase subunit alpha  66.32 
 
 
300 aa  392  1e-108  Bacillus cereus G9842  Bacteria  hitchhiker  0.00000061731  unclonable  1.5256899999999999e-25 
 
 
-
 
NC_007798  NSE_0250  succinyl-CoA synthetase, alpha subunit  65.64 
 
 
290 aa  391  1e-108  Neorickettsia sennetsu str. Miyayama  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1624  succinyl-CoA synthetase, alpha subunit  65.07 
 
 
291 aa  394  1e-108  Acidiphilium cryptum JF-5  Bacteria  normal  0.392007  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0619  succinyl-CoA synthetase, alpha subunit  66.67 
 
 
293 aa  391  1e-108  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  unclonable  0.00000000000000506874  n/a   
 
 
-
 
NC_009674  Bcer98_2487  succinyl-CoA synthetase subunit alpha  65.98 
 
 
300 aa  393  1e-108  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00000153221  n/a   
 
 
-
 
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