| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1658 |
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| Symbol | |
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| ID | 4921421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1907582 |
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| End bp | 1908454 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640163220 |
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| Product | succinyl-CoA synthetase, alpha subunit |
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| Protein accession | YP_001093784 |
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| Protein GI | 127512587 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
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| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0294249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.471073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTAT TAATTAACAA AGATACCAAG GTTATCTGTC AGGGTTTCAC TGGCGGTCAA
GGTACTTTCC ACTCTGAGCA AGCGATCGCT TACGGTACGC AAATGGTTGG CGGTGTTTCG
CCAGGCAAGG GCGGTCAGGT TCACTTGGGT CTGCCAGTAT TCAACACAGT AAAAGATGCT
GTGGCTGAAA CCGGTGCGAC TGCTACCGTT ATCTATGTAC CAGCGCCTTT CTGTAAAGAC
GCTATCCTGG AAGCTATCGA CGGCGGCATC GAGCTAATCG TTTGTATTAC TGAAGGTATT
CCTACTCTGG ATATGCTGGA AGTTAAGGTT AAGCTGGAAG AGACTGGCGT TCGCATGATC
GGTCCAAACT GCCCAGGTGT TATCACTCCG GGCGAATGTA AGATCGGTAT CATGCCAGGT
CACATCCACA AGCCAGGTAA AGTGGGCATC GTGTCTCGCT CTGGTACCCT GACCTATGAA
GCGGTTAAGC AAACGACTGA CGAAGGTTTC GGCCAATCAA CTTGTGTTGG TATCGGTGGT
GACCCAATCC CAGGTACTAA CTTCATCGAC GTATTGGAAA TGTTCCAAAA CGATCCACAG
ACCGAAGCTA TCGTTATGAT CGGCGAGATC GGTGGTACTG CTGAAGAAGA AGCTGCTGCT
TACATCAAGG CTAACGTGAC TAAGCCTGTT GTCTCTTACA TTGCCGGTGT TACTGCACCT
GCTGGTAAGC GTATGGGCCA CGCTGGCGCG ATCATCGCTG GCGGTAAAGG TACGGCTGAA
GACAAGTTTG CTGCACTAGA AGCGGCAGGC GTGACTACCG TACGTTCACT TGCCGACATC
GGCAGTGCAC TGCGTGCTAA GACTGGCTGG TAA
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| Protein sequence | MSVLINKDTK VICQGFTGGQ GTFHSEQAIA YGTQMVGGVS PGKGGQVHLG LPVFNTVKDA
VAETGATATV IYVPAPFCKD AILEAIDGGI ELIVCITEGI PTLDMLEVKV KLEETGVRMI
GPNCPGVITP GECKIGIMPG HIHKPGKVGI VSRSGTLTYE AVKQTTDEGF GQSTCVGIGG
DPIPGTNFID VLEMFQNDPQ TEAIVMIGEI GGTAEEEAAA YIKANVTKPV VSYIAGVTAP
AGKRMGHAGA IIAGGKGTAE DKFAALEAAG VTTVRSLADI GSALRAKTGW
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