Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1839 |
Symbol | |
ID | 7086513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2172115 |
End bp | 2172987 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643460743 |
Product | succinyl-CoA synthetase, alpha subunit |
Protein accession | YP_002357767 |
Protein GI | 217973016 |
COG category | [C] Energy production and conversion |
COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00249209 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0388751 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTCT TAATCAATAA AGATACCAAG GTAATTTGCC AAGGTTTCAC TGGCGGTCAA GGTACATTCC ACTCACAACA AGCTATCGAT TACGGTACGC AAATGGTGGG CGGTGTGTCT CCTGGTAAAG GCGGTCAAAC TCACTTAGGT CTGCCAGTGT TTAACACTGT GAAAGACGCT GTAGCTGCTA CTGGCGCGAC TGCTTCTGTG ATCTATGTAC CGGCTCCTTT CTGTAAAGAT GCCATTCTTG AAGCTATCGA CGGTGGCATT GAGCTTATCG TTTGTATCAC TGAAGGCATT CCTACACTGG ACATGCTGCA AGTTAAAGTG AAGCTTGAAG AAACTGGCGT TCGCATGATC GGCCCTAACT GCCCAGGTGT TATCACCCCA GGTGAATGTA AGATCGGCAT CATGCCAGGT CACATCCACT TAAAAGGCAA AGTGGGTATC GTTTCTCGTT CAGGTACTCT GACCTATGAA GCGGTTAAGC AAACGACTGA TGAAGGTTTC GGCCAATCTA CTTGCGTAGG TATCGGTGGT GACCCAATTC CAGGTACTAA CTTCATCGAC GTATTGGAAA TGTTCCAAAA CGATCCACAG ACTGAAGCGA TTGTTATGAT CGGTGAAATC GGTGGTAACG CTGAAGAAGA TGCGGCTGCT TACATCAAAG CACACGTGAC TAAGCCTGTT GTGTCTTACA TTGCGGGTGT AACTGCACCT GCTGGTAAGC GTATGGGCCA CGCTGGCGCG ATTATCGCTG GCGGTAAAGG TACTGCAGAA GACAAATTTG CTGCATTAGA AGCAGCTGGC GTGACGACTG TCCGCTCGCT AGCTGATATT GGCAAAGCGC TGCGTATTCG TACAGGTTGG TAA
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Protein sequence | MSVLINKDTK VICQGFTGGQ GTFHSQQAID YGTQMVGGVS PGKGGQTHLG LPVFNTVKDA VAATGATASV IYVPAPFCKD AILEAIDGGI ELIVCITEGI PTLDMLQVKV KLEETGVRMI GPNCPGVITP GECKIGIMPG HIHLKGKVGI VSRSGTLTYE AVKQTTDEGF GQSTCVGIGG DPIPGTNFID VLEMFQNDPQ TEAIVMIGEI GGNAEEDAAA YIKAHVTKPV VSYIAGVTAP AGKRMGHAGA IIAGGKGTAE DKFAALEAAG VTTVRSLADI GKALRIRTGW
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