Gene SNSL254_A0798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0798 
Symbol 
ID6485773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp811688 
End bp812557 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content57% 
IMG OID642736210 
Productsuccinyl-CoA synthetase subunit alpha 
Protein accessionYP_002039976 
Protein GI194446366 
COG category[C] Energy production and conversion 
COG ID[COG0074] Succinyl-CoA synthetase, alpha subunit 
TIGRFAM ID[TIGR01019] succinyl-CoA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0283915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.188512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTT TAATTAATAA AGATACCAAG GTTATCTGCC AGGGCTTCAC CGGTAGCCAG 
GGGACTTTCC ACTCCGAACA GGCGATTGCT TACGGTACGC AGATGGTGGG CGGCGTAACG
CCGGGCAAAG GCGGCACCAC GCATCTGGGG CTGCCGGTGT TCAACACCGT GCGCGAAGCG
GTAGAAGCTA CCGGTGCGAC CGCATCCGTT ATCTACGTCC CGGCGCCGTT CTGCAAAGAC
TCCATTCTGG AAGCGATCGA CGCAGGCATC AAACTGATTA TCACCATCAC CGAAGGTATT
CCGACGCTGG ATATGCTGAC CGTGAAAGTG AAGCTGGACG AAGCAGGCGT GCGCATGATC
GGCCCGAACT GCCCAGGTGT GATCACCCCG GGCGAATGCA AAATCGGCAT CATGCCGGGT
CACATTCATA AGCCGGGTAA AGTGGGTATC GTTTCCCGTT CCGGCACGCT GACCTACGAA
GCGGTTAAGC AGACCACCGA CTACGGTTTC GGCCAGTCCA CCTGCGTGGG TATCGGCGGC
GACCCGATTC CGGGCTCTAA CTTTATCGAT ATCCTGAAAC TGTTCCAGGA AGATCCGCAG
ACTGAAGCGA TCGTGATGAT CGGTGAGATC GGCGGTAGTG CAGAAGAAGA AGCGGCGGCT
TACATTAAAG ACCACGTGAC CAAGCCGGTT GTTGGCTATA TCGCGGGTGT TACCGCGCCG
AAAGGCAAGC GTATGGGCCA CGCTGGCGCC ATCATTGCCG GTGGTAAAGG CACCGCGGAT
GAAAAATTCG CCGCGCTGGA AGCTGCTGGC GTGAAGACGG TTCGCAGTCT GGCCGATATC
GGCGAAGCGC TGAAAGCAAT TATAAAATAA
 
Protein sequence
MSVLINKDTK VICQGFTGSQ GTFHSEQAIA YGTQMVGGVT PGKGGTTHLG LPVFNTVREA 
VEATGATASV IYVPAPFCKD SILEAIDAGI KLIITITEGI PTLDMLTVKV KLDEAGVRMI
GPNCPGVITP GECKIGIMPG HIHKPGKVGI VSRSGTLTYE AVKQTTDYGF GQSTCVGIGG
DPIPGSNFID ILKLFQEDPQ TEAIVMIGEI GGSAEEEAAA YIKDHVTKPV VGYIAGVTAP
KGKRMGHAGA IIAGGKGTAD EKFAALEAAG VKTVRSLADI GEALKAIIK