Gene YPK_2965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2965 
Symbol 
ID6087408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3262603 
End bp3263475 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content48% 
IMG OID641598040 
Productsuccinyl-CoA synthetase subunit alpha 
Protein accessionYP_001721692 
Protein GI170025187 
COG category[C] Energy production and conversion 
COG ID[COG0074] Succinyl-CoA synthetase, alpha subunit 
TIGRFAM ID[TIGR01019] succinyl-CoA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATTT TAATTGATAA AAACACCAAA GTTATTTGTC AGGGTTTTAC GGGCAGCCAA 
GGGACTTTCC ACTCCGAACA AGCTATCGCA TACGGTACAA AAATGGTTGG CGGTGTTACG
CCAGGTAAAG GCGGCACACA GCATTTGGGG CTGCCAGTCT TTAATACCGT TCGTGAAGCG
GTAGAAACTA CTGGTGCTAC GGCCTCGGTT ATCTACGTGC CTGCGCCATT CTGTAAAGAT
TCGATTTTGG AAGCGATCGA TGCCGGGATT AAACTGATTA TCTGTATTAC TGAAGGTATT
CCGACGCTGG ATATGCTGGT GGTAAAAGTC AGGTTGGAAC AGAGCGATGC GCGCATGATC
GGTCCGAACT GTCCGGGTGT TATTACTCCT GGTGAATGTA AGATCGGTAT CATGCCGGGT
CACATCCACT TGCCAGGTAA AGTGGGTATC GTTTCACGTT CAGGCACGCT GACCTATGAA
GCCGTAAAAC AGACCACCGA CATTGGTTTC GGCCAATCAA GCTGTGTGGG TATCGGCGGC
GACCCGATCC CAGGCTCTAA CTTTATTGAT ATCCTGAAAC TATTCCAGGA AGATCCGCAG
ACTGAAGTTA TTGTGATGAT CGGTGAAATC GGTGGTAACG CTGAAGAAGA AGCGGCTGCT
TATATTAAAG AGCACGTGAC TAAACCTGTT GTGGGTTATA TCGCGGGTGT GACTGCACCT
AAAGGTAAAC GTATGGGCCA TGCTGGCGCT ATCATTGCGG GCGGTAAAGG GACTGCAGAT
GATAAATTTG CTGCTCTGGA AGCTGCGGGT GTGAAAACAG TTCGTAGCCT GGCAGAAATA
GGTAATGCTG TTAAAGCTGT ATTACCGCAG TAA
 
Protein sequence
MSILIDKNTK VICQGFTGSQ GTFHSEQAIA YGTKMVGGVT PGKGGTQHLG LPVFNTVREA 
VETTGATASV IYVPAPFCKD SILEAIDAGI KLIICITEGI PTLDMLVVKV RLEQSDARMI
GPNCPGVITP GECKIGIMPG HIHLPGKVGI VSRSGTLTYE AVKQTTDIGF GQSSCVGIGG
DPIPGSNFID ILKLFQEDPQ TEVIVMIGEI GGNAEEEAAA YIKEHVTKPV VGYIAGVTAP
KGKRMGHAGA IIAGGKGTAD DKFAALEAAG VKTVRSLAEI GNAVKAVLPQ