Gene Psyc_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0106 
Symbol 
ID3514476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp126500 
End bp127375 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content45% 
IMG OID637668790 
Productsuccinyl-CoA synthetase (ADP-forming) alpha subunit 
Protein accessionYP_263414 
Protein GI71064687 
COG category[C] Energy production and conversion 
COG ID[COG0074] Succinyl-CoA synthetase, alpha subunit 
TIGRFAM ID[TIGR01019] succinyl-CoA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTAT TAATTGATAA AGACACCAAG GTATTGGTTC AAGGTTTTAC GGGTAAAAAT 
GGTACGTTTC ACTCAGAACA AGCCATCGAA TATGGTACTA AGGTTGTTGG CGGCGTAACC
CCAGGTAAAG GCGGTCAAAC GCACCTAGGT TTACCAGTAT TCAACACCAT GAACGAAGCA
ATGGCAGCTA CCCAAGCAGA TGCTTCTGTT ATCTATGTAC CAGCTCCTTT TGTACTAGAT
TCTATCATCG AAGCAATTGA CGCTGGTGTA AAGCTAATTG TTGTTATCAC TGAAGGCGTA
CCAACGCTTG ATATGCTAAA AGCCAAACGC TATCTTGAAG AAGCGGGCGA TGTACGTCTA
ATTGGTCCTA ACTGCCCAGG CGTTATCACC CCAGGTCAGT GCAAAATCGG CATCATGCCA
GGTCATATCC ATTTGCCAGG TAAAGTGGGT ATCATCTCAC GCTCTGGTAC TTTGACCTAT
GAAGCCGTTG CTCAAACCAC TACACTTGGT TTTGGTCAAT CAACGTGTAT CGGTATCGGT
GGCGATCCGA TTCCTGGTAT GAACCAGATT GATGCATTGA AATTGTTCCA AGAAGATCCA
CAAACTGAAG CGATTATCCT AATCGGTGAA ATCGGTGGTA CTGCTGAAGA AGAAGCAGCC
GCTTATATCA AAGATCACGT AACTAAGCCA GTTGTTGGTT ATATCGCTGG TGTTACTGCT
CCTGAAGGCA AGCGTATGGG TCATGCCGGC GCTATCATCT CTGGTGGTCA AGGTACTGCT
GAAGATAAAT TTAAAGCGTT CGAAGCGGCA GGCATTGCTT ACACGCGTGA CCCATCAAAA
TTGGGTGAGA AACTAAAAGA AGTGACAGGC TGGTAA
 
Protein sequence
MSVLIDKDTK VLVQGFTGKN GTFHSEQAIE YGTKVVGGVT PGKGGQTHLG LPVFNTMNEA 
MAATQADASV IYVPAPFVLD SIIEAIDAGV KLIVVITEGV PTLDMLKAKR YLEEAGDVRL
IGPNCPGVIT PGQCKIGIMP GHIHLPGKVG IISRSGTLTY EAVAQTTTLG FGQSTCIGIG
GDPIPGMNQI DALKLFQEDP QTEAIILIGE IGGTAEEEAA AYIKDHVTKP VVGYIAGVTA
PEGKRMGHAG AIISGGQGTA EDKFKAFEAA GIAYTRDPSK LGEKLKEVTG W