| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1989 |
|---|
| Symbol | |
|---|
| ID | 8535148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 2131505 |
|---|
| End bp | 2132392 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 646384371 |
|---|
| Product | succinyl-CoA synthetase, alpha subunit |
|---|
| Protein accession | YP_003263858 |
|---|
| Protein GI | 261856575 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCC TCATCAACAA ACAAACACGC GTCATCTGTC AGGGCTTTAC CGGCAAACAG
GGTACCTTCC ATTCCGAACA GGCCATTGCC TACGGTACGA ATTTTGTGGG CGGCGTCACG
CCGGGCAAGG GCGGCCAAAG CCATCTCGAT CGTCCTGTGT TCGATACCGT ACATGACGCG
GTGCAACAAA CCGCTGCCAC GGCGAGCATG ATCTACGTGC CTGCCCCGTT CGCCGCCGAT
GCCATTCTGG AAGCGGCCGA TGCGGGCATC GAAGTCATCG CCTGCATCAC CGAAGGCATT
CCCGTTCTCG ACATGCTGAA CGTCAAGGCC GTGCTTGCTT CGGACTATCC AGACGTCCGC
CTGATCGGCC CCAATTGCCC CGGTCTGATC ACTCCGGGCG AATGTAAGAT CGGCATCATG
CCGGGCTCGA TTCACCTGCC GGGACGCATC GGCATCGTGT CCCGCTCCGG CACGCTCACC
TATGAAGCGG TGGCTCAAAC CACCGCTGCG GGCTTGGGCC AAAGCACCTG CGTTGGTATC
GGTGGTGACC CGATCCACGG TATGGATTTT ATCGACTGCC TCGCGCTGTT TGCCGACGAC
CCTCAAACCG AGGCGGTTAT CATGGTCGGC GAGATTGGCG GTAATGCCGA AGAAGAAGCC
GCTCACTTCA TCAAGGAACA GTTCAATAAG CCGGTGGTGG CCTACATTGC AGGCGCCACC
GCGCCCACGG GCAAGCGCAT GGGTCATGCG GGCGCCGTGA TTGCAGGCGG ACGCGGCAGC
GCGGAAGACA AATTCCGCGC CCTCAAGGCC GCGGGCGTAC ATATCGTACG CGACCCAACC
ACCATGGGCC GCACCATGGC AAATCTGCTC GGCTCGAAGA ACGCATGA
|
|---|
| Protein sequence | MSILINKQTR VICQGFTGKQ GTFHSEQAIA YGTNFVGGVT PGKGGQSHLD RPVFDTVHDA
VQQTAATASM IYVPAPFAAD AILEAADAGI EVIACITEGI PVLDMLNVKA VLASDYPDVR
LIGPNCPGLI TPGECKIGIM PGSIHLPGRI GIVSRSGTLT YEAVAQTTAA GLGQSTCVGI
GGDPIHGMDF IDCLALFADD PQTEAVIMVG EIGGNAEEEA AHFIKEQFNK PVVAYIAGAT
APTGKRMGHA GAVIAGGRGS AEDKFRALKA AGVHIVRDPT TMGRTMANLL GSKNA
|
|---|
| |