Gene EcDH1_2907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2907 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3116070 
End bp3116939 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content54% 
IMG OID 
Productsuccinyl-CoA synthetase, alpha subunit 
Protein accessionACX40540 
Protein GI260450118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.398696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATTT TAATCGATAA AAACACCAAG GTTATCTGCC AGGGCTTTAC CGGTAGCCAG 
GGGACTTTCC ACTCAGAACA GGCCATTGCA TACGGCACTA AAATGGTTGG CGGCGTAACC
CCAGGTAAAG GCGGCACCAC CCACCTCGGC CTGCCGGTGT TCAACACCGT GCGTGAAGCC
GTTGCTGCCA CTGGCGCTAC CGCTTCTGTT ATCTACGTAC CAGCACCGTT CTGCAAAGAC
TCCATTCTGG AAGCCATCGA CGCAGGCATC AAACTGATTA TCACCATCAC TGAAGGCATC
CCGACGCTGG ATATGCTGAC CGTGAAAGTG AAGCTGGATG AAGCAGGCGT TCGTATGATC
GGCCCGAACT GCCCAGGCGT TATCACTCCG GGTGAATGCA AAATCGGTAT CCAGCCTGGT
CACATTCACA AACCGGGTAA AGTGGGTATC GTTTCCCGTT CCGGTACACT GACCTATGAA
GCGGTTAAAC AGACCACGGA TTACGGTTTC GGTCAGTCGA CCTGTGTCGG TATCGGCGGT
GACCCGATCC CGGGCTCTAA CTTTATCGAC ATTCTCGAAA TGTTCGAAAA AGATCCGCAG
ACCGAAGCGA TCGTGATGAT CGGTGAGATC GGCGGTAGCG CTGAAGAAGA AGCAGCTGCG
TACATCAAAG AGCACGTTAC CAAGCCAGTT GTGGGTTACA TCGCTGGTGT GACTGCGCCG
AAAGGCAAAC GTATGGGCCA CGCGGGTGCC ATCATTGCCG GTGGGAAAGG GACTGCGGAT
GAGAAATTCG CTGCTCTGGA AGCCGCAGGC GTGAAAACCG TTCGCAGCCT GGCGGATATC
GGTGAAGCAC TGAAAACTGT TCTGAAATAA
 
Protein sequence
MSILIDKNTK VICQGFTGSQ GTFHSEQAIA YGTKMVGGVT PGKGGTTHLG LPVFNTVREA 
VAATGATASV IYVPAPFCKD SILEAIDAGI KLIITITEGI PTLDMLTVKV KLDEAGVRMI
GPNCPGVITP GECKIGIQPG HIHKPGKVGI VSRSGTLTYE AVKQTTDYGF GQSTCVGIGG
DPIPGSNFID ILEMFEKDPQ TEAIVMIGEI GGSAEEEAAA YIKEHVTKPV VGYIAGVTAP
KGKRMGHAGA IIAGGKGTAD EKFAALEAAG VKTVRSLADI GEALKTVLK