Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_2907 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 3116070 |
End bp | 3116939 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | succinyl-CoA synthetase, alpha subunit |
Protein accession | ACX40540 |
Protein GI | 260450118 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.398696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATTT TAATCGATAA AAACACCAAG GTTATCTGCC AGGGCTTTAC CGGTAGCCAG GGGACTTTCC ACTCAGAACA GGCCATTGCA TACGGCACTA AAATGGTTGG CGGCGTAACC CCAGGTAAAG GCGGCACCAC CCACCTCGGC CTGCCGGTGT TCAACACCGT GCGTGAAGCC GTTGCTGCCA CTGGCGCTAC CGCTTCTGTT ATCTACGTAC CAGCACCGTT CTGCAAAGAC TCCATTCTGG AAGCCATCGA CGCAGGCATC AAACTGATTA TCACCATCAC TGAAGGCATC CCGACGCTGG ATATGCTGAC CGTGAAAGTG AAGCTGGATG AAGCAGGCGT TCGTATGATC GGCCCGAACT GCCCAGGCGT TATCACTCCG GGTGAATGCA AAATCGGTAT CCAGCCTGGT CACATTCACA AACCGGGTAA AGTGGGTATC GTTTCCCGTT CCGGTACACT GACCTATGAA GCGGTTAAAC AGACCACGGA TTACGGTTTC GGTCAGTCGA CCTGTGTCGG TATCGGCGGT GACCCGATCC CGGGCTCTAA CTTTATCGAC ATTCTCGAAA TGTTCGAAAA AGATCCGCAG ACCGAAGCGA TCGTGATGAT CGGTGAGATC GGCGGTAGCG CTGAAGAAGA AGCAGCTGCG TACATCAAAG AGCACGTTAC CAAGCCAGTT GTGGGTTACA TCGCTGGTGT GACTGCGCCG AAAGGCAAAC GTATGGGCCA CGCGGGTGCC ATCATTGCCG GTGGGAAAGG GACTGCGGAT GAGAAATTCG CTGCTCTGGA AGCCGCAGGC GTGAAAACCG TTCGCAGCCT GGCGGATATC GGTGAAGCAC TGAAAACTGT TCTGAAATAA
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Protein sequence | MSILIDKNTK VICQGFTGSQ GTFHSEQAIA YGTKMVGGVT PGKGGTTHLG LPVFNTVREA VAATGATASV IYVPAPFCKD SILEAIDAGI KLIITITEGI PTLDMLTVKV KLDEAGVRMI GPNCPGVITP GECKIGIQPG HIHKPGKVGI VSRSGTLTYE AVKQTTDYGF GQSTCVGIGG DPIPGSNFID ILEMFEKDPQ TEAIVMIGEI GGSAEEEAAA YIKEHVTKPV VGYIAGVTAP KGKRMGHAGA IIAGGKGTAD EKFAALEAAG VKTVRSLADI GEALKTVLK
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