Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1713 |
Symbol | |
ID | 4256554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2022758 |
End bp | 2023630 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638122371 |
Product | succinyl-CoA synthetase (ADP-forming) alpha subunit |
Protein accession | YP_737763 |
Protein GI | 114047213 |
COG category | [C] Energy production and conversion |
COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0303591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTAT TAATTAACAA AGATACCAAG GTAATCTGCC AAGGCTTTAC CGGTGGTCAA GGTACTTTCC ACTCTCAACA AGCTATCGAT TACGGTACGC AAATGGTTGG TGGTGTATCT CCAGGTAAAG GCGGTACTGA GCACTTAGGT CTGCCAGTGT TCAACACTGT GAAAGACGCT GTTGCTGCCA CTGGCGCTAC TGCTTCTGTT ATCTACGTTC CAGCTCCTTT CTGTAAAGAC GCTATCCTCG AAGCTATCGA CGGTGGTATT GAGCTGATCG TTTGTATCAC TGAAGGTATC CCAACACTGG ATATGCTGGA AGTGAAAGTG AAGCTAGAAG AAACTGGCGT TCGCATGATC GGTCCAAACT GCCCAGGTGT TATCACTCCA GGTGAATGTA AGATTGGTAT TATGCCAGGC CACATCCACT TAAAAGGTAA AGTGGGTATC GTTTCTCGTT CTGGTACGCT GACCTATGAA GCGGTTAAGC AAACTACTGA CGAAGGTTTC GGCCAATCTA CTTGCGTAGG TATTGGTGGT GACCCAATCC CAGGCACTAA CTTCATCGAC GTATTGGAAA TGTTCCAGAA CGATCCACAG ACTGAAGCCA TCGTGATGAT CGGTGAAATC GGTGGTACTG CTGAAGAAGA AGCGGCTGCT TATATCAAAG CTAACGTGAC TAAACCTGTT GTTTCTTACA TCGCGGGTGT AACTGCTCCT GCTGGTAAGC GTATGGGTCA CGCGGGTGCG ATCATTGCTG GCGGTAAAGG TACTGCTGCT GACAAATTTG CTGCATTAGA AGCAGCGGGC GTGACAACTG TCCGCTCGTT AGCGGATATC GGCAAAGCGC TGCGTGCTAA AACCGGTTGG TAA
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Protein sequence | MSVLINKDTK VICQGFTGGQ GTFHSQQAID YGTQMVGGVS PGKGGTEHLG LPVFNTVKDA VAATGATASV IYVPAPFCKD AILEAIDGGI ELIVCITEGI PTLDMLEVKV KLEETGVRMI GPNCPGVITP GECKIGIMPG HIHLKGKVGI VSRSGTLTYE AVKQTTDEGF GQSTCVGIGG DPIPGTNFID VLEMFQNDPQ TEAIVMIGEI GGTAEEEAAA YIKANVTKPV VSYIAGVTAP AGKRMGHAGA IIAGGKGTAA DKFAALEAAG VTTVRSLADI GKALRAKTGW
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