| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2499 |
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| Symbol | |
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| ID | 5107375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2761526 |
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| End bp | 2762413 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640503743 |
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| Product | succinyl-CoA synthetase subunit alpha |
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| Protein accession | YP_001187987 |
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| Protein GI | 146307522 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
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| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.285546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.123009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCC TGATCAACAA AGACACCAAG GTCATCTGCC AGGGCTTCAC CGGCTCGCAG
GGCACCTTCC ACAGCGAACA AGCCATCGCC TACGGCACCA AGATGGTCGG CGGCGTGACT
CCGGGCAAGG GTGGCAGCAC TCACCTGGGC CTGCCGGTGT TCAACACCGT CAAGGAAGCC
GTGGAAGCCA CTGGCGCTGA AGCGTCGGTG ATCTACGTTC CGGCTCCGTT CTGCAAGGAC
TCGATCCTGG AAGCGGCCAA CGGCGGCATC AAGCTGATCG TCTGCATCAC CGAAGGCATT
CCGACCATCG ACATGCTGGA AGCCAAGGTC AAGTGCGACG AGCTGGGCGT ACGCCTGATC
GGCCCGAACT GCCCGGGCGT GATCACTCCC GGCGAGTGCA AGATCGGCAT CATGCCGGGT
CACATCCACC TGCCGGGCAA AGTAGGCATC GTGTCGCGTT CCGGCACCCT GACCTATGAA
GCCGTGAAGC AGACCACCGA CGCCGGCTTC GGCCAGTCCA CCTGCGTTGG CATCGGCGGT
GACCCCATCC CGGGCTCCAA CTTCATCGAT ATCCTGAAGC TGTTCCAGGA AGATCCGAAG
ACCGAAGCGA TCGTCATGAT CGGTGAGATC GGCGGTTCGG CCGAGGAAGA AGCGGCTGCC
TTCATCAAGG CCAACGTCAC CAAGCCGGTG GTTTCCTACA TCGCTGGTGT GACCGCTCCT
CCCGGCAAGC GCATGGGCCA CGCTGGCGCC ATCATCTCCG GCGGCAAGGG CACTGCAGAC
GAGAAGTTCG CTGCGCTGCA GGACGCCGGT GTGAAAACCG TGCGTTCCCT GGCTGACATC
GGCAAGGCCC TGGCCGAGCT GACCGGCTGG GAAGTCAAGA ACGCCTAA
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| Protein sequence | MSILINKDTK VICQGFTGSQ GTFHSEQAIA YGTKMVGGVT PGKGGSTHLG LPVFNTVKEA
VEATGAEASV IYVPAPFCKD SILEAANGGI KLIVCITEGI PTIDMLEAKV KCDELGVRLI
GPNCPGVITP GECKIGIMPG HIHLPGKVGI VSRSGTLTYE AVKQTTDAGF GQSTCVGIGG
DPIPGSNFID ILKLFQEDPK TEAIVMIGEI GGSAEEEAAA FIKANVTKPV VSYIAGVTAP
PGKRMGHAGA IISGGKGTAD EKFAALQDAG VKTVRSLADI GKALAELTGW EVKNA
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