Gene B21_00677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagB21_00677 
SymbolsucD 
ID8115171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21 
KingdomBacteria 
Replicon accessionNC_012892 
Strand
Start bp722250 
End bp723119 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content53% 
IMG OID644846948 
Producthypothetical protein 
Protein accessionYP_002998521 
Protein GI251784217 
COG category[C] Energy production and conversion 
COG ID[COG0074] Succinyl-CoA synthetase, alpha subunit 
TIGRFAM ID[TIGR01019] succinyl-CoA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATTT TAATCGATAA AAACACCAAG GTTATCTGCC AGGGCTTTAC CGGTAGCCAG 
GGGACTTTCC ACTCAGAACA GGCCATTGCA TACGGCACTA AAATGGTTGG TGGCGTAACT
CCAGGTAAAG GCGGCACTAC CCACCTCGGC CTGCCGGTGT TCAACACCGT GCGTGAAGCT
GTTGCTGCTA CTGGCGCTAC CGCTTCTGTT ATCTACGTAC CAGCACCGTT CTGCAAAGAC
TCCATTCTGG AAGCCATCGA CGCAGGCATC AAACTGATTA TCACCATCAC TGAAGGCATC
CCGACGCTGG ATATGCTGAC TGTGAAAGTG AAACTGGACG AAGCAGGCGT TCGTATGATC
GGCCCGAACT GCCCAGGCGT TATCACTCCG GGTGAATGCA AAATCGGTAT CCAGCCGGGT
CACATTCACA AACCGGGTAA AGTGGGTATC GTTTCCCGTT CCGGTACACT GACCTATGAA
GCGGTTAAAC AGACCACGGA TTACGGTTTC GGTCAGTCGA CCTGTGTCGG TATCGGCGGT
GACCCGATCC CTGGCTCTAA CTTTATCGAC ATTCTCGAAA TGTTCGAAAA AGATCCGCAG
ACCGAAGCGA TCGTGATGAT TGGTGAGATC GGCGGTAGCG CTGAAGAAGA AGCGGCAGCG
TACATCAAAG AGCACGTTAC CAAGCCAGTT GTGGGCTACA TTGCTGGTGT GACTGCGCCG
AAAGGCAAAC GTATGGGCCA CGCGGGTGCC ATCATTGCCG GTGGGAAAGG GACTGCGGAT
GAGAAATTCG CTGCTCTGGA AGCCGCAGGC GTGAAAACCG TTCGCAGCCT GGCGGATATC
GGTGAAGCAC TGAAAACTGT TCTGAAATAA
 
Protein sequence
MSILIDKNTK VICQGFTGSQ GTFHSEQAIA YGTKMVGGVT PGKGGTTHLG LPVFNTVREA 
VAATGATASV IYVPAPFCKD SILEAIDAGI KLIITITEGI PTLDMLTVKV KLDEAGVRMI
GPNCPGVITP GECKIGIQPG HIHKPGKVGI VSRSGTLTYE AVKQTTDYGF GQSTCVGIGG
DPIPGSNFID ILEMFEKDPQ TEAIVMIGEI GGSAEEEAAA YIKEHVTKPV VGYIAGVTAP
KGKRMGHAGA IIAGGKGTAD EKFAALEAAG VKTVRSLADI GEALKTVLK