Gene Psyr_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2013 
Symbol 
ID3367527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2336753 
End bp2337634 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content58% 
IMG OID637652362 
Productsuccinyl-CoA synthetase subunit alpha 
Protein accessionYP_235094 
Protein GI66045253 
COG category[C] Energy production and conversion 
COG ID[COG0074] Succinyl-CoA synthetase, alpha subunit 
TIGRFAM ID[TIGR01019] succinyl-CoA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.143561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.801568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCC TGATCAATAA AGACACCAAG GTTATCTGCC AGGGTTTCAC TGGTTCGCAA 
GGTACCTTCC ACTCCGAGCA AGCCATTGCC TACGGCACCA AGATGGTGGG CGGCGTGACA
CCAGGCAAGG GTGGCACCAC GCACCTGAAC CTGCCCGTGT TCAACACTGT GAAAGAAGCA
GTAGACACCA CTGGCGCAAC CGCCAGCGTG ATCTACGTTC CGGCTCCTTT CTGCAAGGAT
TCCATCCTTG AAGCAGCGTT CGGCGGCATC AAGCTGATCG TTTGCATCAC CGAAGGCATC
CCGACCATCG ACATGCTGGA AGCCAAGGTC AAGTGCGACG AGCTGGGTGT GGTCCTGATC
GGTCCTAACT GCCCAGGCGT CATCACTCCG GGCGAGTGCA AGATCGGCAT CATGCCAGGT
CACATTCACT TGCCAGGCAA GGTCGGCATC GTGTCGCGTT CCGGCACCCT GACTTACGAA
GCTGTGAAGC AGACCACTGA CGCCGGTTTC GGTCAGTCCA CCTGTGTTGG TATCGGCGGT
GACCCGATCC CTGGCTCGAA CTTCATCGAC ATCCTGAAGC TGTTCCAGGA AGATCCTAAG
ACCGAAGCGA TCGTCATGAT CGGTGAGATC GGCGGTTCGG CTGAAGAAGA AGCGGCTGCC
TACATCAAGG CACACGTGAC CAAGCCGGTT GTTTCCTACA TCGCTGGTGT GACTGCTCCT
CCGGGCAAGC GCATGGGCCA TGCCGGTGCA ATCATCTCGG GTGGTAAAGG TACTGCAGAC
GAGAAATTCG CTGCACTGCA GGACGCTGGC GTGAAAACCG TGCGCTCCCT GGCAGACATC
GGCAAGGCCC TGGCCGAGCT GACCGGTTGG CCGACCAAGT AA
 
Protein sequence
MSVLINKDTK VICQGFTGSQ GTFHSEQAIA YGTKMVGGVT PGKGGTTHLN LPVFNTVKEA 
VDTTGATASV IYVPAPFCKD SILEAAFGGI KLIVCITEGI PTIDMLEAKV KCDELGVVLI
GPNCPGVITP GECKIGIMPG HIHLPGKVGI VSRSGTLTYE AVKQTTDAGF GQSTCVGIGG
DPIPGSNFID ILKLFQEDPK TEAIVMIGEI GGSAEEEAAA YIKAHVTKPV VSYIAGVTAP
PGKRMGHAGA IISGGKGTAD EKFAALQDAG VKTVRSLADI GKALAELTGW PTK