Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2013 |
Symbol | |
ID | 3367527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2336753 |
End bp | 2337634 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637652362 |
Product | succinyl-CoA synthetase subunit alpha |
Protein accession | YP_235094 |
Protein GI | 66045253 |
COG category | [C] Energy production and conversion |
COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.143561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.801568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTCC TGATCAATAA AGACACCAAG GTTATCTGCC AGGGTTTCAC TGGTTCGCAA GGTACCTTCC ACTCCGAGCA AGCCATTGCC TACGGCACCA AGATGGTGGG CGGCGTGACA CCAGGCAAGG GTGGCACCAC GCACCTGAAC CTGCCCGTGT TCAACACTGT GAAAGAAGCA GTAGACACCA CTGGCGCAAC CGCCAGCGTG ATCTACGTTC CGGCTCCTTT CTGCAAGGAT TCCATCCTTG AAGCAGCGTT CGGCGGCATC AAGCTGATCG TTTGCATCAC CGAAGGCATC CCGACCATCG ACATGCTGGA AGCCAAGGTC AAGTGCGACG AGCTGGGTGT GGTCCTGATC GGTCCTAACT GCCCAGGCGT CATCACTCCG GGCGAGTGCA AGATCGGCAT CATGCCAGGT CACATTCACT TGCCAGGCAA GGTCGGCATC GTGTCGCGTT CCGGCACCCT GACTTACGAA GCTGTGAAGC AGACCACTGA CGCCGGTTTC GGTCAGTCCA CCTGTGTTGG TATCGGCGGT GACCCGATCC CTGGCTCGAA CTTCATCGAC ATCCTGAAGC TGTTCCAGGA AGATCCTAAG ACCGAAGCGA TCGTCATGAT CGGTGAGATC GGCGGTTCGG CTGAAGAAGA AGCGGCTGCC TACATCAAGG CACACGTGAC CAAGCCGGTT GTTTCCTACA TCGCTGGTGT GACTGCTCCT CCGGGCAAGC GCATGGGCCA TGCCGGTGCA ATCATCTCGG GTGGTAAAGG TACTGCAGAC GAGAAATTCG CTGCACTGCA GGACGCTGGC GTGAAAACCG TGCGCTCCCT GGCAGACATC GGCAAGGCCC TGGCCGAGCT GACCGGTTGG CCGACCAAGT AA
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Protein sequence | MSVLINKDTK VICQGFTGSQ GTFHSEQAIA YGTKMVGGVT PGKGGTTHLN LPVFNTVKEA VDTTGATASV IYVPAPFCKD SILEAAFGGI KLIVCITEGI PTIDMLEAKV KCDELGVVLI GPNCPGVITP GECKIGIMPG HIHLPGKVGI VSRSGTLTYE AVKQTTDAGF GQSTCVGIGG DPIPGSNFID ILKLFQEDPK TEAIVMIGEI GGSAEEEAAA YIKAHVTKPV VSYIAGVTAP PGKRMGHAGA IISGGKGTAD EKFAALQDAG VKTVRSLADI GKALAELTGW PTK
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