19 homologs were found in PanDaTox collection
for query gene Noca_2176 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008699  Noca_2176  helix-turn-helix domain-containing protein  100 
 
 		 125 aa  250  4.0000000000000004e-66  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_2219  helix-turn-helix domain-containing protein  77.33 
 
 		 146 aa  111  3e-24  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_0666  transcriptional regulator, XRE family  40.66 
 
 		 150 aa  50.1  0.00001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_2981  transcriptional regulator, XRE family  39.39 
 
 		 312 aa  45.4  0.0003  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_4362  XRE family transcriptional regulator  48.33 
 
 		 69 aa  44.3  0.0006  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013165  Shel_05170  hypothetical protein  40.68 
 
 		 436 aa  43.5  0.001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.602534  normal  0.439559 
 
 
-
 
NC_011898  Ccel_2790  transcriptional regulator, XRE family  31.94 
 
 		 133 aa  43.1  0.001  Clostridium cellulolyticum H10  Bacteria  unclonable  0.000000000203467  n/a   
 
 
-
 
NC_014148  Plim_2141  helix-turn-helix domain protein  38.98 
 
 		 82 aa  42.4  0.002  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_009616  Tmel_1478  XRE family transcriptional regulator  43.4 
 
 		 72 aa  42  0.002  Thermosipho melanesiensis BI429  Bacteria  normal  1  n/a   
 
 
-
 
NC_008530  LGAS_0638  XRE family transcriptional regulator  36.54 
 
 		 74 aa  41.2  0.004  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.000000543981  normal  1 
 
 
-
 
NC_008530  LGAS_0576  XRE family transcriptional regulator  36.54 
 
 		 74 aa  41.2  0.004  Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.00000000000016932  normal  0.922143 
 
 
-
 
NC_008322  Shewmr7_3893  XRE family transcriptional regulator  30.48 
 
 		 107 aa  41.2  0.005  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1621  transcriptional regulator, XRE family  36.76 
 
 		 368 aa  40.8  0.006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_008527  LACR_2142  XRE family transcriptional regulator  28.09 
 
 		 175 aa  40.8  0.006  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_4126  XRE family transcriptional regulator  42.11 
 
 		 84 aa  40.8  0.007  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012034  Athe_1027  transcriptional regulator, XRE family  44.23 
 
 		 321 aa  40.8  0.007  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A3326  DNA-binding protein  39.62 
 
 		 374 aa  40.4  0.008  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009339  Mflv_5468  XRE family transcriptional regulator  33.75 
 
 		 174 aa  40.4  0.008  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.624713 
 
 
-
 
NC_013165  Shel_06770  predicted transcriptional regulator  34.33 
 
 		 106 aa  40  0.01  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
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