Gene Dhaf_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1621 
Symbol 
ID7258590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1730586 
End bp1731692 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content51% 
IMG OID643561524 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002458104 
Protein GI219667669 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA TCAATCTGGC GTCGGTCCTT GTGGCCAAAC GCAGGGAAAA AGGAATCACC 
CAGGATGAAC TTGCAGCCTA TATCGGTGTT TCCAAAGCAT CTGTTTCTAA GTGGGAAACA
GGGCAAAGCT ATCCCGACAT CACATTCCTC CCACTGCTTG CTGCCTATTT TAACATCAGC
ATCGACGAGT TGATGAGCTA TTCTCCGCAA ATGGAGCGCT CGGACATCGC CAAGCTCTAC
ACCCGGTTAG CCGCCGATTT TGCTAGTCGG CCTTTTGAAG ATGTGATCGC GGAGTGTGCT
GCCCTCATCA AAAAATATTA CTCCTGTTTC CCGCTCCTTG TGCAACTGGT CAAGCTGTAC
ACAAATCACT TCATGCTGGC GGGAACACAG GAGCGCCAAG AGGCCCTCCT GAACGAAACC
GTGACGCTAT GTGAGCGGAT TCAGGCAGAA AGCGGCGATG TTCAGCTGGC CAAAGAAGCG
GTTTCATATC AGGCCCTTTG CTCTCTGGCT CTGCAAAGGC CACAGCAGGT TCTGGATTTA
CTTGGGGAAG GAATCCGCCC CATGCTGCCG GAGGGTATGT TAATCGCACA AGCCTATCAG
GTTATGGGCA ACATCGGCAA AGCCAAAGAA ACCTTGCAGA CAGAGCTATA TCAGTATGTA
ATGGTGGCCT TTCAAGGGCT GCTGAACGTC CTGCAAATGG CTACGGACCA TTTTGAAAAA
GCGGAAGAAG CCTTTTTGAG GGCCTCAGAT CTGGCACAAA TTTTTAATAT GAAACAGCTG
AACCCCAACA ATGTCATCCT GCTTTACGCA CTGGGCGCCC GTATGTATTG TGCGAACAAT
TCCCACGCCA AAGCTATTGA ACTGCTTGGC AACTATGTGG ATACCTGTGT GGGAGGATTC
TTTCCCTTCG AGCTCCATGG GGATGCCTTC TTTGATCTGA TTGACCCGTG GCTGAAGGAT
TGCGGTGCAG CCGCCCCCCG TAGTGAGCAG GTGATCAAGG AAAGCATGCT GCGGGATGTA
CTGATGAATC CAGCCTTCGC TTCGCTGCAG GATGACCCTG GCTACCGGCG GCTCGTCCAA
AAAATGGAGA GATTTATAGG CAGGTAA
 
Protein sequence
MKEINLASVL VAKRREKGIT QDELAAYIGV SKASVSKWET GQSYPDITFL PLLAAYFNIS 
IDELMSYSPQ MERSDIAKLY TRLAADFASR PFEDVIAECA ALIKKYYSCF PLLVQLVKLY
TNHFMLAGTQ ERQEALLNET VTLCERIQAE SGDVQLAKEA VSYQALCSLA LQRPQQVLDL
LGEGIRPMLP EGMLIAQAYQ VMGNIGKAKE TLQTELYQYV MVAFQGLLNV LQMATDHFEK
AEEAFLRASD LAQIFNMKQL NPNNVILLYA LGARMYCANN SHAKAIELLG NYVDTCVGGF
FPFELHGDAF FDLIDPWLKD CGAAAPRSEQ VIKESMLRDV LMNPAFASLQ DDPGYRRLVQ
KMERFIGR