| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0638 |
|---|
| Symbol | |
|---|
| ID | 4440161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 643818 |
|---|
| End bp | 644042 |
|---|
| Gene Length | 225 bp |
|---|
| Protein Length | 74 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639672495 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_814470 |
|---|
| Protein GI | 116629298 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1476] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.000000543981 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 189 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGGG AACTTAAAAG CTTACGAGTT GGAGCTGGGC TTACGCAAAC TGAATTAGCA
AAGCGATTAG GCGTTACTAA TGTTACAGTT TCAAGGTGGG AGAGAGGAGA AGCAATTCCA
AAGCCCAAGT ATATTAAAGC CATGGCAAAA TTATTTAATA TCAAGGGGCA GGATATTTTT
TTAAATTTAA TTACTACTAA AGCTTATAAA GTTGCTACAA AATAG
|
|---|
| Protein sequence | MKRELKSLRV GAGLTQTELA KRLGVTNVTV SRWERGEAIP KPKYIKAMAK LFNIKGQDIF
LNLITTKAYK VATK
|
|---|
| |