Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_2142 |
Symbol | |
ID | 4434404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 2013289 |
End bp | 2013816 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639667832 |
Product | XRE family transcriptional regulator |
Protein accession | YP_811729 |
Protein GI | 116512822 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACGATA GAGAAATAAA TAAATTTGTC GGAATGAAAA TAAAAGAGTT TCGCAAAAAT AAAAAGTTGA CCCAGCAAGG CTTAGCTGAT TTGGTCGGAG TGAAAAACAG CGCAATCTCT AATTATGAAC AAGGAACTAG GATTCCTAAA AGAGATTTCT TATTCAGGGT TGCAAATGCC TTGGGCGTTT CAATAGACGA ATTTTTTCCT ATACAAAATG AAGAAACATC TTCTACTCTA TCCGAAATAA ATAAAATCAG TTCACAACTC GAAGAACCAC GTCAGAAAAT TGTTTTAAAC ACTGCTTCTT CTCAATTGGA AGAGCAAGAA AAGGCTAAAA GAGCTGTTAA ACCAAAACCA AAAGTTACTC CTCTTTTTGA TATAAATTCT CCGCTTACTG ACGAAGAGCT TCAAGAGGCT GTTGACGAAG CTGTAGCTTT TGATGGCGTG CCTCTAACAG ATAGAGAAAA AGAACTTTAT AAACATTTGC TCCGTGAAGC GTGGGAAGAA GACCATGACA GGGGGTAA
|
Protein sequence | MDDREINKFV GMKIKEFRKN KKLTQQGLAD LVGVKNSAIS NYEQGTRIPK RDFLFRVANA LGVSIDEFFP IQNEETSSTL SEINKISSQL EEPRQKIVLN TASSQLEEQE KAKRAVKPKP KVTPLFDINS PLTDEELQEA VDEAVAFDGV PLTDREKELY KHLLREAWEE DHDRG
|
| |