Gene Shel_05170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05170 
Symbol 
ID8394409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp605203 
End bp606513 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content59% 
IMG OID644985279 
Producthypothetical protein 
Protein accessionYP_003142925 
Protein GI257063253 
COG category[S] Function unknown 
COG ID[COG2954] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.602534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.439559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATT ATGCATTCGG GAACTACATC TTCCATCTGC GGAAACAGGC GGGACTGACA 
CAGGCGGAAC TCGCCAAGCT GGTCGGGGTG ACCAACAAGG CGGTATCCAA ATGGGAGGTC
GGCAAATCGA AGCCGAGCGT CGAATCGGTT CGGAAGCTGT CGGGGCTGTT CCACGTCAGC
GTGGACGAGC TGCTGAGGCA GAGGGACGCC GGGCGCAGGG CGGAAATAAC CAAGGTCGTC
ATCACGGGAG GTCCCTGCGC GGGCAAGTCC ACGGCTATGA GCTGGGTGCA GAACGCGTTT
ACCCAGATGG GGTACGTTGT GTTGTTTGTT CCGGAAACCG CTACCGAGCT GATTACGGGC
GGCGTGGCTC CCTGGACCTG CGACTCGAAC AGCAGCTATC AGAAGTGCCA GCTCCGTTTG
CAGTTCGAGA AGGAGAAGGT TTTCGAGCAG GCGGCGGAAA CGATGGATGC GGACAAGGTG
CTGATTGTGT GCGACCGCGG CACCATGGAC AACAAGGCCT ACATGGATGA TTTGGAGTTC
GCCCAGGCCC TCGAGCACTT CGGCACGAAC GAAGTTCAGC TGCGCGACAG CTATGACGCT
GTGTTTCACC TGGTGACGGC AGCAAAAGGT GCAGAGGAGT TCTATACGAA GTCGAATAAC
GCCGCCCGTA CCGAAACGGT GGAAGAGGCG GCGGACCGTG ATGACAAGCT GATCGCGGCC
TGGACCGGCC ATCCGCACCT GAGGGTCATC GACAACTCCA CGGATTTCGA AGACAAGATG
CGGCGGCTGG TCGCGGAAAT CTCGTCGTTT CTCGGTGAGC CGGAGCCTTA CGAGATCGAA
CGCAAGTTCC TGATCGAATA CCCCGACGTC AAGTGGCTGG AATCGCTGCC GAATTGCCAG
CGCGTGGAAA TCATCCAAAC GTACCTGCGG TCGGACAGCG ACAAGGAGGT CCGCGTCCGC
CAGCGGGGAT TCGAGGGGCA TTACATATAT ACCCAGACCA CGAAGCGGAC CATCAGCGAC
GTGAAGCGCG TGGAGGTGGA GCGCAGGCTT TCGGAGGGGG AGTACATTCG CCTGCTGATG
AGCGCGGACA CGAGCCGGCG CCAGATTCGC AAGGACCGGT ATTGCCTGAC GTACGAGAAC
CAGTATTTCG AGATCGACAT TTTCCCGTTT TGGCACGACA AGGCGATTGC CGAGATCGAG
CTCAGCGACG AGAACGCGGA CATCGCATTC CCAAAGCAGA TCAAGGTGAT CAGGGAGGTT
ACCGACGACG AGTCGTTCAA GAACGCTTCG CTGGCGAAAA TAGCCGACTA G
 
Protein sequence
MNDYAFGNYI FHLRKQAGLT QAELAKLVGV TNKAVSKWEV GKSKPSVESV RKLSGLFHVS 
VDELLRQRDA GRRAEITKVV ITGGPCAGKS TAMSWVQNAF TQMGYVVLFV PETATELITG
GVAPWTCDSN SSYQKCQLRL QFEKEKVFEQ AAETMDADKV LIVCDRGTMD NKAYMDDLEF
AQALEHFGTN EVQLRDSYDA VFHLVTAAKG AEEFYTKSNN AARTETVEEA ADRDDKLIAA
WTGHPHLRVI DNSTDFEDKM RRLVAEISSF LGEPEPYEIE RKFLIEYPDV KWLESLPNCQ
RVEIIQTYLR SDSDKEVRVR QRGFEGHYIY TQTTKRTISD VKRVEVERRL SEGEYIRLLM
SADTSRRQIR KDRYCLTYEN QYFEIDIFPF WHDKAIAEIE LSDENADIAF PKQIKVIREV
TDDESFKNAS LAKIAD