46 homologs were found in PanDaTox collection
for query gene Msil_3564 on replicon NC_011666
Organism: Methylocella silvestris BL2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011666  Msil_3564  succinate dehydrogenase, hydrophobic membrane anchor protein  100 
 
 		 129 aa  256  7e-68  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010581  Bind_2750  succinate dehydrogenase, hydrophobic membrane anchor protein  58.14 
 
 		 130 aa  156  9e-38  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009505  BOV_1831  succinate dehydrogenase, hydrophobic membrane anchor protein  42.86 
 
 		 131 aa  105  3e-22  Brucella ovis ATCC 25840  Bacteria  normal  0.405977  n/a   
 
 
-
 
NC_004310  BR1903  succinate dehydrogenase, hydrophobic membrane anchor protein, putative  42.86 
 
 		 131 aa  104  4e-22  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_1966  succinate dehydrogenase hydrophobic membrane anchor  42.86 
 
 		 135 aa  104  4e-22  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.192092 
 
 
-
 
NC_009667  Oant_0952  succinate dehydrogenase hydrophobic membrane anchor  41.27 
 
 		 131 aa  102  2e-21  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.676521  n/a   
 
 
-
 
NC_007964  Nham_3617  succinate dehydrogenase, cytochrome b subunit  42.15 
 
 		 133 aa  100  9e-21  Nitrobacter hamburgensis X14  Bacteria  normal  0.0610127  n/a   
 
 
-
 
NC_007406  Nwi_2799  succinate dehydrogenase, cytochrome b subunit  42.98 
 
 		 135 aa  97.4  6e-20  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_0326  succinate dehydrogenase, cytochrome b subunit  40.16 
 
 		 140 aa  96.3  1e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_0071  succinate dehydrogenase, cytochrome b subunit  41.46 
 
 		 140 aa  93.2  9e-19  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_0217  succinate dehydrogenase, hydrophobic membrane anchor protein  38.93 
 
 		 137 aa  92  3e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.294581  n/a   
 
 
-
 
NC_009485  BBta_0229  succinate dehydrogenase subunit D  42.02 
 
 		 124 aa  90.9  5e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0481798  normal  1 
 
 
-
 
NC_007958  RPD_0480  succinate dehydrogenase, cytochrome b subunit  40.94 
 
 		 140 aa  86.3  1e-16  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.74591 
 
 
-
 
NC_012850  Rleg_3979  succinate dehydrogenase, hydrophobic membrane anchor protein  41.18 
 
 		 126 aa  84  7e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.705456  normal  0.476216 
 
 
-
 
NC_011369  Rleg2_3691  succinate dehydrogenase, hydrophobic membrane anchor protein  39.5 
 
 		 126 aa  82  0.000000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009636  Smed_2958  succinate dehydrogenase hydrophobic membrane anchor  39.52 
 
 		 126 aa  80.1  0.00000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.0363094  normal  1 
 
 
-
 
NC_011894  Mnod_7245  succinate dehydrogenase, hydrophobic membrane anchor protein  30.83 
 
 		 137 aa  78.6  0.00000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.396127  n/a   
 
 
-
 
NC_010511  M446_6039  succinate dehydrogenase, hydrophobic membrane anchor protein  30.83 
 
 		 137 aa  77.4  0.00000000000007  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.0685536 
 
 
-
 
NC_009719  Plav_1434  succinate dehydrogenase hydrophobic membrane anchor  39.5 
 
 		 141 aa  77.4  0.00000000000007  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011989  Avi_4136  succinate dehydrogenase hydrophobic membrane anchor  37.82 
 
 		 126 aa  77  0.00000000000008  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008783  BARBAKC583_0089  succinate dehydrogenase, hydrophobic membrane anchor protein  34.82 
 
 		 128 aa  76.3  0.0000000000001  Bartonella bacilliformis KC583  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_4277  succinate dehydrogenase, hydrophobic membrane anchor protein  34.15 
 
 		 139 aa  75.9  0.0000000000002  Methylobacterium populi BJ001  Bacteria  normal  0.692368  normal  0.965438 
 
 
-
 
NC_007802  Jann_0810  succinate dehydrogenase subunit D  35.34 
 
 		 123 aa  75.1  0.0000000000003  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.851404 
 
 
-
 
NC_011757  Mchl_3893  succinate dehydrogenase, hydrophobic membrane anchor protein  33.33 
 
 		 139 aa  73.2  0.000000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.20647  normal  1 
 
 
-
 
NC_010172  Mext_3601  succinate dehydrogenase, hydrophobic membrane anchor protein  33.33 
 
 		 139 aa  73.6  0.000000000001  Methylobacterium extorquens PA1  Bacteria  normal  0.0736554  normal  1 
 
 
-
 
NC_002977  MCA1549  succinate dehydrogenase, hydrophobic membrane anchor protein, putative  33.61 
 
 		 126 aa  68.2  0.00000000004  Methylococcus capsulatus str. Bath  Bacteria  normal  0.591464  n/a   
 
 
-
 
NC_008254  Meso_3245  succinate dehydrogenase subunit D  29.41 
 
 		 127 aa  66.6  0.0000000001  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010513  Xfasm12_0379  succinate dehydrogenase hydrophobic membrane anchor subunit  37.6 
 
 		 127 aa  66.6  0.0000000001  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_010577  XfasM23_0343  succinate dehydrogenase, hydrophobic membrane anchor protein  36.8 
 
 		 127 aa  65.1  0.0000000003  Xylella fastidiosa M23  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_1333  succinate dehydrogenase subunit D  32.26 
 
 		 126 aa  64.7  0.0000000004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.934114 
 
 
-
 
NC_010717  PXO_00603  succinate dehydrogenase, hydrophobic membrane anchor protein  36.8 
 
 		 128 aa  64.3  0.0000000006  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_2847  succinate dehydrogenase subunit D  39.37 
 
 		 123 aa  63.5  0.0000000008  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A1203  succinate dehydrogenase subunit D  40.78 
 
 		 128 aa  62.4  0.000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.767553  n/a   
 
 
-
 
NC_009952  Dshi_2866  hypothetical protein  34.82 
 
 		 123 aa  59.7  0.00000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_1311  succinate dehydrogenase subunit D  32.73 
 
 		 129 aa  59.3  0.00000002  Sphingomonas wittichii RW1  Bacteria  normal  0.0693068  normal  1 
 
 
-
 
NC_011365  Gdia_2108  succinate dehydrogenase, hydrophobic membrane anchor protein  37.29 
 
 		 140 aa  59.3  0.00000002  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008686  Pden_0568  putative succinate dehydrogenase, hydrophobic membrane anchor protein  33.04 
 
 		 129 aa  58.5  0.00000003  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.0825505 
 
 
-
 
NC_011071  Smal_1536  succinate dehydrogenase, hydrophobic membrane anchor protein  38.71 
 
 		 128 aa  57.8  0.00000005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_0458  succinate dehydrogenase, hydrophobic membrane anchor protein  37.76 
 
 		 139 aa  53.1  0.000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.152846  normal  1 
 
 
-
 
NC_008687  Pden_3020  succinate dehydrogenase, cytochrome b subunit  32.48 
 
 		 127 aa  51.6  0.000004  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.915417 
 
 
-
 
NC_012853  Rleg_5819  succinate dehydrogenase, hydrophobic membrane anchor protein  32.73 
 
 		 127 aa  51.6  0.000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008048  Sala_3031  succinate dehydrogenase, cytochrome b subunit  29.82 
 
 		 134 aa  50.8  0.000007  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008789  Hhal_0045  succinate dehydrogenase, cytochrome b subunit  27.69 
 
 		 127 aa  50.4  0.000009  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007794  Saro_1745  succinate dehydrogenase subunit D  33.66 
 
 		 127 aa  48.1  0.00004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.287201  n/a   
 
 
-
 
NC_008043  TM1040_3526  succinate dehydrogenase subunit D  32.67 
 
 		 123 aa  47  0.00009  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012853  Rleg_5889  succinate dehydrogenase, hydrophobic membrane anchor protein  29.63 
 
 		 127 aa  42.7  0.002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
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