Gene Rru_A1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1203 
Symbol 
ID3833701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1420403 
End bp1420789 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content61% 
IMG OID637825292 
Productsuccinate dehydrogenase subunit D 
Protein accessionYP_426291 
Protein GI83592539 
COG category[C] Energy production and conversion 
COG ID[COG2142] Succinate dehydrogenase, hydrophobic anchor subunit 
TIGRFAM ID[TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.767553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCTAC GCTCTCCGCT CGGCCGCGCG CGCGGCCTGG GTTCCGCCAA GGCGGGTGCC 
GCCAATCACT GGATGGCCGA GCGCCTTCCG GCCATCGCCT TGGTGCCGCT GGCGCTGTGG
TTCGTTTTCG TCGCCATCAT CAGCAATCTG GGGGCGAGCT ACGCCCAGAT TCAGGCTTTC
ATGGCGGTGC CGTTGAACGC CACCTTGATG CTGCTGACGG TGTTCTGCGC CTTTTTCCAC
GGCGCGCTCG GCCTGATCGT GATTATTGAA GATTACGTCC AAAATCACGC CGTCAAGAAC
GCTTTGGTCT TCGGAACCAA GCTCTACGCC TTGTTCGGTG CCGTTCTGGC CGCCGTCTCC
ATCCTCAAGC TGACTTTCGG GGGCTAA
 
Protein sequence
MSLRSPLGRA RGLGSAKAGA ANHWMAERLP AIALVPLALW FVFVAIISNL GASYAQIQAF 
MAVPLNATLM LLTVFCAFFH GALGLIVIIE DYVQNHAVKN ALVFGTKLYA LFGAVLAAVS
ILKLTFGG