47 homologs were found in PanDaTox collection
for query gene Dshi_2866 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009952  Dshi_2866  hypothetical protein  100 
 
 		 123 aa  249  1e-65  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_0810  succinate dehydrogenase subunit D  50.41 
 
 		 123 aa  125  2.0000000000000002e-28  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.851404 
 
 
-
 
NC_008686  Pden_0568  putative succinate dehydrogenase, hydrophobic membrane anchor protein  47.15 
 
 		 129 aa  121  3e-27  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.0825505 
 
 
-
 
NC_008043  TM1040_3526  succinate dehydrogenase subunit D  52.85 
 
 		 123 aa  120  5e-27  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_0975  succinate dehydrogenase subunit D  46.34 
 
 		 123 aa  118  1.9999999999999998e-26  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009428  Rsph17025_0087  hypothetical protein  46.34 
 
 		 123 aa  119  1.9999999999999998e-26  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.5065  normal  1 
 
 
-
 
NC_009049  Rsph17029_2635  putative succinate dehydrogenase, hydrophobic membrane anchor protein  46.34 
 
 		 123 aa  118  1.9999999999999998e-26  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004310  BR1903  succinate dehydrogenase, hydrophobic membrane anchor protein, putative  41.13 
 
 		 131 aa  79.7  0.00000000000001  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_009505  BOV_1831  succinate dehydrogenase, hydrophobic membrane anchor protein  41.13 
 
 		 131 aa  79  0.00000000000002  Brucella ovis ATCC 25840  Bacteria  normal  0.405977  n/a   
 
 
-
 
NC_011369  Rleg2_3691  succinate dehydrogenase, hydrophobic membrane anchor protein  38.21 
 
 		 126 aa  78.6  0.00000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009636  Smed_2958  succinate dehydrogenase hydrophobic membrane anchor  37.4 
 
 		 126 aa  78.2  0.00000000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.0363094  normal  1 
 
 
-
 
NC_012850  Rleg_3979  succinate dehydrogenase, hydrophobic membrane anchor protein  36.29 
 
 		 126 aa  77.4  0.00000000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.705456  normal  0.476216 
 
 
-
 
NC_009667  Oant_0952  succinate dehydrogenase hydrophobic membrane anchor  42.72 
 
 		 131 aa  75.5  0.0000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.676521  n/a   
 
 
-
 
NC_008340  Mlg_1333  succinate dehydrogenase subunit D  36.29 
 
 		 126 aa  75.1  0.0000000000003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.934114 
 
 
-
 
NC_008254  Meso_3245  succinate dehydrogenase subunit D  37.7 
 
 		 127 aa  68.6  0.00000000003  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007794  Saro_1745  succinate dehydrogenase subunit D  33.06 
 
 		 127 aa  65.1  0.0000000003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.287201  n/a   
 
 
-
 
NC_008048  Sala_3031  succinate dehydrogenase, cytochrome b subunit  35.2 
 
 		 134 aa  64.3  0.0000000005  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_1966  succinate dehydrogenase hydrophobic membrane anchor  37.07 
 
 		 135 aa  63.9  0.0000000007  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.192092 
 
 
-
 
NC_011989  Avi_4136  succinate dehydrogenase hydrophobic membrane anchor  31.2 
 
 		 126 aa  63.2  0.000000001  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011365  Gdia_2108  succinate dehydrogenase, hydrophobic membrane anchor protein  33.64 
 
 		 140 aa  63.2  0.000000001  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_1311  succinate dehydrogenase subunit D  30.08 
 
 		 129 aa  61.2  0.000000005  Sphingomonas wittichii RW1  Bacteria  normal  0.0693068  normal  1 
 
 
-
 
NC_010581  Bind_2750  succinate dehydrogenase, hydrophobic membrane anchor protein  35.23 
 
 		 130 aa  60.5  0.000000007  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_3564  succinate dehydrogenase, hydrophobic membrane anchor protein  34.82 
 
 		 129 aa  59.7  0.00000001  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_009719  Plav_1434  succinate dehydrogenase hydrophobic membrane anchor  36.13 
 
 		 141 aa  59.7  0.00000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008789  Hhal_0045  succinate dehydrogenase, cytochrome b subunit  38.46 
 
 		 127 aa  58.9  0.00000002  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_2847  succinate dehydrogenase subunit D  32.79 
 
 		 123 aa  58.5  0.00000003  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_7245  succinate dehydrogenase, hydrophobic membrane anchor protein  31.9 
 
 		 137 aa  56.6  0.0000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.396127  n/a   
 
 
-
 
NC_008687  Pden_3020  succinate dehydrogenase, cytochrome b subunit  31.58 
 
 		 127 aa  55.1  0.0000003  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.915417 
 
 
-
 
NC_007643  Rru_A1203  succinate dehydrogenase subunit D  36.19 
 
 		 128 aa  55.1  0.0000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.767553  n/a   
 
 
-
 
NC_011071  Smal_1536  succinate dehydrogenase, hydrophobic membrane anchor protein  34.15 
 
 		 128 aa  55.1  0.0000003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_6039  succinate dehydrogenase, hydrophobic membrane anchor protein  31.67 
 
 		 137 aa  55.1  0.0000003  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.0685536 
 
 
-
 
NC_010725  Mpop_4277  succinate dehydrogenase, hydrophobic membrane anchor protein  30.83 
 
 		 139 aa  54.7  0.0000004  Methylobacterium populi BJ001  Bacteria  normal  0.692368  normal  0.965438 
 
 
-
 
NC_011757  Mchl_3893  succinate dehydrogenase, hydrophobic membrane anchor protein  30.83 
 
 		 139 aa  53.5  0.0000008  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.20647  normal  1 
 
 
-
 
NC_010172  Mext_3601  succinate dehydrogenase, hydrophobic membrane anchor protein  30.83 
 
 		 139 aa  53.5  0.0000008  Methylobacterium extorquens PA1  Bacteria  normal  0.0736554  normal  1 
 
 
-
 
NC_002977  MCA1549  succinate dehydrogenase, hydrophobic membrane anchor protein, putative  30.77 
 
 		 126 aa  53.5  0.000001  Methylococcus capsulatus str. Bath  Bacteria  normal  0.591464  n/a   
 
 
-
 
NC_010717  PXO_00603  succinate dehydrogenase, hydrophobic membrane anchor protein  32.26 
 
 		 128 aa  51.6  0.000004  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010577  XfasM23_0343  succinate dehydrogenase, hydrophobic membrane anchor protein  32.52 
 
 		 127 aa  50.4  0.000008  Xylella fastidiosa M23  Bacteria  normal  1  n/a   
 
 
-
 
NC_010513  Xfasm12_0379  succinate dehydrogenase hydrophobic membrane anchor subunit  32.52 
 
 		 127 aa  50.1  0.000009  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_009484  Acry_1880  succinate dehydrogenase, cytochrome b subunit  31 
 
 		 125 aa  48.9  0.00002  Acidiphilium cryptum JF-5  Bacteria  normal  0.519683  n/a   
 
 
-
 
NC_008783  BARBAKC583_0089  succinate dehydrogenase, hydrophobic membrane anchor protein  27.27 
 
 		 128 aa  47.8  0.00005  Bartonella bacilliformis KC583  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_3617  succinate dehydrogenase, cytochrome b subunit  27.73 
 
 		 133 aa  44.7  0.0004  Nitrobacter hamburgensis X14  Bacteria  normal  0.0610127  n/a   
 
 
-
 
NC_007406  Nwi_2799  succinate dehydrogenase, cytochrome b subunit  29.57 
 
 		 135 aa  44.7  0.0005  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_0458  succinate dehydrogenase, hydrophobic membrane anchor protein  31.18 
 
 		 139 aa  44.3  0.0006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.152846  normal  1 
 
 
-
 
NC_011004  Rpal_0217  succinate dehydrogenase, hydrophobic membrane anchor protein  25.45 
 
 		 137 aa  43.1  0.001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.294581  n/a   
 
 
-
 
NC_007778  RPB_0326  succinate dehydrogenase, cytochrome b subunit  26.13 
 
 		 140 aa  43.5  0.001  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_4839  succinate dehydrogenase, hydrophobic membrane anchor protein  34.15 
 
 		 135 aa  42  0.003  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_0071  succinate dehydrogenase, cytochrome b subunit  25.45 
 
 		 140 aa  40.8  0.006  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
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