Gene Hhal_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0045 
Symbol 
ID4710300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp47682 
End bp48065 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content65% 
IMG OID639854503 
Productsuccinate dehydrogenase, cytochrome b subunit 
Protein accessionYP_001001642 
Protein GI121996855 
COG category[C] Energy production and conversion 
COG ID[COG2142] Succinate dehydrogenase, hydrophobic anchor subunit 
TIGRFAM ID[TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGGT ACGAGACCGC CGTCTCCCGG GCCCGCGGCC TCGGTTCGGC TAAGAACGGC 
TTCCACCACT GGTGGCACCA ACGCCTTACG GCGCTGGTGC TGGTCCCGCT GATGATGTGG
CTGGGGATCG GACTGGCCCT GCAGGCGGGT GCCGACTTCG AGGCGGCCCG GGCATGGGTG
GCGAACCCGT TCAACGCCAC GCTGCTCATC GCGGCCATCA TCATGCTCTT CTATCACGGG
GCGCTCGGGG TCCAGGTGGT CATCGAAGAC TACGTGCACC TGGAGGGGCT GAAGTGGTTC
GGCAACCTCG CTGTTTACTT CGCGTGTTTC CTGGTGGCCG TCGCCGGGAT CCTGGCGGTC
ATCCAAATCG TTCTGGGGGG CTAA
 
Protein sequence
MRRYETAVSR ARGLGSAKNG FHHWWHQRLT ALVLVPLMMW LGIGLALQAG ADFEAARAWV 
ANPFNATLLI AAIIMLFYHG ALGVQVVIED YVHLEGLKWF GNLAVYFACF LVAVAGILAV
IQIVLGG