Gene Smed_2958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2958 
Symbol 
ID5323835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3107052 
End bp3107432 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content59% 
IMG OID640791909 
Productsuccinate dehydrogenase hydrophobic membrane anchor 
Protein accessionYP_001328622 
Protein GI150398155 
COG category[C] Energy production and conversion 
COG ID[COG2142] Succinate dehydrogenase, hydrophobic anchor subunit 
TIGRFAM ID[TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0363094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGC GCACTCCTCT CGGCAAGGTC CGGGGTCTCG GTTCGGCAAA GGAAGGTACG 
GATCACTTCT GGCGGCAGCG CGTCACGGCC GTTGCAAGCA TTCCGCTCAC CATCTTCTTC
GTCGTCTTCC TCGCCCATTA TGCGGGCGCT CCGCATGCGG AACTGCTTGC GGCCCTTGCA
AATCCGTTCG TGGCGGTGAC CATGGGGCTG ATGGTTGTCG CCGGCCTTGT TCACATGAAG
ATCGGAATGC AGGTCATCAT CGAGGACTAC GTCCATGGGG AGGGCGCCAA GATCGCACTT
CTCATGCTCA ACACATTCTT CACGATCGCG GTCGGCGGAC TCTGTCTTTT CGCCGTCCTG
AAGATCGCTT TTGCAGGATA A
 
Protein sequence
MSMRTPLGKV RGLGSAKEGT DHFWRQRVTA VASIPLTIFF VVFLAHYAGA PHAELLAALA 
NPFVAVTMGL MVVAGLVHMK IGMQVIIEDY VHGEGAKIAL LMLNTFFTIA VGGLCLFAVL
KIAFAG