Gene Pden_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3020 
Symbol 
ID4581586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp198689 
End bp199072 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content68% 
IMG OID639770346 
Productsuccinate dehydrogenase, cytochrome b subunit 
Protein accessionYP_916799 
Protein GI119385744 
COG category[C] Energy production and conversion 
COG ID[COG2142] Succinate dehydrogenase, hydrophobic anchor subunit 
TIGRFAM ID[TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.915417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCC GCCATATCCC GCCATTCGCA CGGGCACGCG GCCTTGGAGC AGCGGGGCAT 
GGCACGGGTC GTTGGTGGGC ACAGCGGGTC TCTGCCGCGG GTCTGGTGCC GCTGGTCCTG
TGGTTCGCCC TGGCGTTGGC CGGCGGCGCG GCCGCGGATC ACGCGAAGCT GGTGGCCTGG
TTGGCGGCGC CGCTCAATTC CGGGCTCATG ATCCTGCTGT TGATGGCCGG CTTTCATCAT
GCGGCGCTGG GGCTCCAGGT TCTGGCCGAG GACTACATTC ATTCTGGCGC GCGGTTCGTC
GCCGCGGCGG CGATCCAGCT GGCCTGCTTT GCAGGTGTCG TGTTCGGCAT CGCTTCGGTG
CTGCGCATCG CGCCGATGGC ATAG
 
Protein sequence
MTIRHIPPFA RARGLGAAGH GTGRWWAQRV SAAGLVPLVL WFALALAGGA AADHAKLVAW 
LAAPLNSGLM ILLLMAGFHH AALGLQVLAE DYIHSGARFV AAAAIQLACF AGVVFGIASV
LRIAPMA