| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0217 |
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| Symbol | |
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| ID | 6407861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 236477 |
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| End bp | 236890 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642710125 |
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| Product | succinate dehydrogenase, hydrophobic membrane anchor protein |
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| Protein accession | YP_001989253 |
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| Protein GI | 192288648 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2142] Succinate dehydrogenase, hydrophobic anchor subunit |
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| TIGRFAM ID | [TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.294581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAGCG ACGCCCACGG CAAGCGCACG CCGACCTCGA TGCGCACTCC GATCGGCAAG
GTGCGCAAAT TCGGCCCCGC CGGCTCCGGA ACCTCGGATT TCTGGCAGCA GCGCATCACC
GGCGTCGCCA TGGCGCTGCT GATCCTGCCG ACCATCGTGG TGATCATGAT GCTGCTCGGC
CGCAACCAGG CGGCCGCCGC GCAGATCCTC GGCTCTCCGC TGATCTCGCT GATCATGATC
CTGTTCATCA TTGCCTCCGC GATCCACATG AAGATCGGCA TGCAGGTGGT GATCGAGGAC
TACGTCCAGA ACGAAAAGCT CAAGTTGGTC ACCATCATGG CCAACAACTT CTTCTCGATC
GCCGTGGCGC TGGCCGCGAT CTTTGCGATC TTCAAAATGG CATCCGGAGT TTAA
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| Protein sequence | MSSDAHGKRT PTSMRTPIGK VRKFGPAGSG TSDFWQQRIT GVAMALLILP TIVVIMMLLG
RNQAAAAQIL GSPLISLIMI LFIIASAIHM KIGMQVVIED YVQNEKLKLV TIMANNFFSI
AVALAAIFAI FKMASGV
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