54 homologs were found in PanDaTox collection
for query gene Mchl_3893 on replicon NC_011757
Organism: Methylobacterium chloromethanicum CM4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011757  Mchl_3893  succinate dehydrogenase, hydrophobic membrane anchor protein  100 
 
 		 139 aa  275  1e-73  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.20647  normal  1 
 
 
-
 
NC_010725  Mpop_4277  succinate dehydrogenase, hydrophobic membrane anchor protein  98.56 
 
 		 139 aa  272  1.0000000000000001e-72  Methylobacterium populi BJ001  Bacteria  normal  0.692368  normal  0.965438 
 
 
-
 
NC_010172  Mext_3601  succinate dehydrogenase, hydrophobic membrane anchor protein  99.28 
 
 		 139 aa  271  2.0000000000000002e-72  Methylobacterium extorquens PA1  Bacteria  normal  0.0736554  normal  1 
 
 
-
 
NC_010511  M446_6039  succinate dehydrogenase, hydrophobic membrane anchor protein  63.97 
 
 		 137 aa  176  1e-43  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.0685536 
 
 
-
 
NC_011894  Mnod_7245  succinate dehydrogenase, hydrophobic membrane anchor protein  63.64 
 
 		 137 aa  171  2.9999999999999996e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.396127  n/a   
 
 
-
 
NC_009720  Xaut_1966  succinate dehydrogenase hydrophobic membrane anchor  48.39 
 
 		 135 aa  132  9.999999999999999e-31  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.192092 
 
 
-
 
NC_010505  Mrad2831_0458  succinate dehydrogenase, hydrophobic membrane anchor protein  63.24 
 
 		 139 aa  129  9e-30  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.152846  normal  1 
 
 
-
 
NC_009667  Oant_0952  succinate dehydrogenase hydrophobic membrane anchor  44.8 
 
 		 131 aa  124  3e-28  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.676521  n/a   
 
 
-
 
NC_011369  Rleg2_3691  succinate dehydrogenase, hydrophobic membrane anchor protein  46.03 
 
 		 126 aa  123  7e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_3245  succinate dehydrogenase subunit D  47.2 
 
 		 127 aa  123  8.000000000000001e-28  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012850  Rleg_3979  succinate dehydrogenase, hydrophobic membrane anchor protein  46.03 
 
 		 126 aa  122  1e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.705456  normal  0.476216 
 
 
-
 
NC_011004  Rpal_0217  succinate dehydrogenase, hydrophobic membrane anchor protein  41.18 
 
 		 137 aa  122  1e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.294581  n/a   
 
 
-
 
NC_009505  BOV_1831  succinate dehydrogenase, hydrophobic membrane anchor protein  44 
 
 		 131 aa  122  1e-27  Brucella ovis ATCC 25840  Bacteria  normal  0.405977  n/a   
 
 
-
 
NC_011989  Avi_4136  succinate dehydrogenase hydrophobic membrane anchor  44.44 
 
 		 126 aa  121  3e-27  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_0071  succinate dehydrogenase, cytochrome b subunit  43.65 
 
 		 140 aa  121  3e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004310  BR1903  succinate dehydrogenase, hydrophobic membrane anchor protein, putative  44 
 
 		 131 aa  121  3e-27  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_009636  Smed_2958  succinate dehydrogenase hydrophobic membrane anchor  43.65 
 
 		 126 aa  120  8e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.0363094  normal  1 
 
 
-
 
NC_007778  RPB_0326  succinate dehydrogenase, cytochrome b subunit  40.32 
 
 		 140 aa  117  7e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007964  Nham_3617  succinate dehydrogenase, cytochrome b subunit  43.55 
 
 		 133 aa  113  1.0000000000000001e-24  Nitrobacter hamburgensis X14  Bacteria  normal  0.0610127  n/a   
 
 
-
 
NC_007406  Nwi_2799  succinate dehydrogenase, cytochrome b subunit  42.86 
 
 		 135 aa  108  3e-23  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_0480  succinate dehydrogenase, cytochrome b subunit  41.27 
 
 		 140 aa  104  4e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.74591 
 
 
-
 
NC_009485  BBta_0229  succinate dehydrogenase subunit D  43.9 
 
 		 124 aa  99.4  1e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0481798  normal  1 
 
 
-
 
NC_008340  Mlg_1333  succinate dehydrogenase subunit D  40.8 
 
 		 126 aa  99  2e-20  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.934114 
 
 
-
 
NC_009511  Swit_1311  succinate dehydrogenase subunit D  41.94 
 
 		 129 aa  97.8  4e-20  Sphingomonas wittichii RW1  Bacteria  normal  0.0693068  normal  1 
 
 
-
 
NC_010581  Bind_2750  succinate dehydrogenase, hydrophobic membrane anchor protein  37.98 
 
 		 130 aa  97.4  6e-20  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008783  BARBAKC583_0089  succinate dehydrogenase, hydrophobic membrane anchor protein  35.48 
 
 		 128 aa  95.9  2e-19  Bartonella bacilliformis KC583  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_2847  succinate dehydrogenase subunit D  44.63 
 
 		 123 aa  94.4  5e-19  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009719  Plav_1434  succinate dehydrogenase hydrophobic membrane anchor  43.75 
 
 		 141 aa  94  6e-19  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008048  Sala_3031  succinate dehydrogenase, cytochrome b subunit  40.83 
 
 		 134 aa  85.1  3e-16  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008789  Hhal_0045  succinate dehydrogenase, cytochrome b subunit  39.84 
 
 		 127 aa  82.4  0.000000000000002  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007794  Saro_1745  succinate dehydrogenase subunit D  36.89 
 
 		 127 aa  78.6  0.00000000000003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.287201  n/a   
 
 
-
 
NC_010513  Xfasm12_0379  succinate dehydrogenase hydrophobic membrane anchor subunit  41.8 
 
 		 127 aa  77.8  0.00000000000005  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_010577  XfasM23_0343  succinate dehydrogenase, hydrophobic membrane anchor protein  42.4 
 
 		 127 aa  76.3  0.0000000000001  Xylella fastidiosa M23  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_00603  succinate dehydrogenase, hydrophobic membrane anchor protein  38.52 
 
 		 128 aa  73.9  0.0000000000006  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011666  Msil_3564  succinate dehydrogenase, hydrophobic membrane anchor protein  33.33 
 
 		 129 aa  73.2  0.000000000001  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_002977  MCA1549  succinate dehydrogenase, hydrophobic membrane anchor protein, putative  33.88 
 
 		 126 aa  72.8  0.000000000001  Methylococcus capsulatus str. Bath  Bacteria  normal  0.591464  n/a   
 
 
-
 
NC_007643  Rru_A1203  succinate dehydrogenase subunit D  34.38 
 
 		 128 aa  69.7  0.00000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.767553  n/a   
 
 
-
 
NC_011071  Smal_1536  succinate dehydrogenase, hydrophobic membrane anchor protein  37.1 
 
 		 128 aa  68.2  0.00000000004  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012853  Rleg_5819  succinate dehydrogenase, hydrophobic membrane anchor protein  32.5 
 
 		 127 aa  66.2  0.0000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008687  Pden_3020  succinate dehydrogenase, cytochrome b subunit  36.21 
 
 		 127 aa  64.3  0.0000000006  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.915417 
 
 
-
 
NC_012853  Rleg_5889  succinate dehydrogenase, hydrophobic membrane anchor protein  34.75 
 
 		 127 aa  63.9  0.0000000007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008686  Pden_0568  putative succinate dehydrogenase, hydrophobic membrane anchor protein  30.89 
 
 		 129 aa  61.6  0.000000003  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.0825505 
 
 
-
 
NC_007802  Jann_0810  succinate dehydrogenase subunit D  33.06 
 
 		 123 aa  61.6  0.000000004  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.851404 
 
 
-
 
NC_011365  Gdia_2108  succinate dehydrogenase, hydrophobic membrane anchor protein  30.17 
 
 		 140 aa  61.2  0.000000005  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009484  Acry_1880  succinate dehydrogenase, cytochrome b subunit  32.67 
 
 		 125 aa  60.8  0.000000005  Acidiphilium cryptum JF-5  Bacteria  normal  0.519683  n/a   
 
 
-
 
NC_010338  Caul_4839  succinate dehydrogenase, hydrophobic membrane anchor protein  36.64 
 
 		 135 aa  60.8  0.000000006  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_2866  hypothetical protein  30.83 
 
 		 123 aa  53.5  0.0000008  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009049  Rsph17029_2635  putative succinate dehydrogenase, hydrophobic membrane anchor protein  30 
 
 		 123 aa  52  0.000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_0975  succinate dehydrogenase subunit D  30 
 
 		 123 aa  52  0.000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009428  Rsph17025_0087  hypothetical protein  29.17 
 
 		 123 aa  51.2  0.000005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.5065  normal  1 
 
 
-
 
NC_008043  TM1040_3526  succinate dehydrogenase subunit D  35 
 
 		 123 aa  43.9  0.0007  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010117  COXBURSA331_A1562  succinate dehydrogenase, hydrophobic membrane anchor protein  27.06 
 
 		 113 aa  43.1  0.001  Coxiella burnetii RSA 331  Bacteria  normal  0.725991  n/a   
 
 
-
 
NC_009727  CBUD_0591  succinate dehydrogenase membrane anchor subunit  27.06 
 
 		 115 aa  43.1  0.001  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.141224  n/a   
 
 
-
 
NC_002978  WD1222  succinate dehydrogenase, hydrophobic membrane anchor protein, putative  27.78 
 
 		 118 aa  43.1  0.001  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  1  n/a   
 
 
-
 
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