55 homologs were found in PanDaTox collection
for query gene BBta_0229 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009485  BBta_0229  succinate dehydrogenase subunit D  100 
 
 		 124 aa  248  3e-65  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0481798  normal  1 
 
 
-
 
NC_007964  Nham_3617  succinate dehydrogenase, cytochrome b subunit  79.03 
 
 		 133 aa  206  9e-53  Nitrobacter hamburgensis X14  Bacteria  normal  0.0610127  n/a   
 
 
-
 
NC_007406  Nwi_2799  succinate dehydrogenase, cytochrome b subunit  77.42 
 
 		 135 aa  201  2e-51  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_0326  succinate dehydrogenase, cytochrome b subunit  72.58 
 
 		 140 aa  189  9e-48  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_0071  succinate dehydrogenase, cytochrome b subunit  73.39 
 
 		 140 aa  187  2.9999999999999997e-47  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_0217  succinate dehydrogenase, hydrophobic membrane anchor protein  70.97 
 
 		 137 aa  184  4e-46  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.294581  n/a   
 
 
-
 
NC_007958  RPD_0480  succinate dehydrogenase, cytochrome b subunit  73.39 
 
 		 140 aa  164  5e-40  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.74591 
 
 
-
 
NC_009505  BOV_1831  succinate dehydrogenase, hydrophobic membrane anchor protein  49.59 
 
 		 131 aa  123  1e-27  Brucella ovis ATCC 25840  Bacteria  normal  0.405977  n/a   
 
 
-
 
NC_004310  BR1903  succinate dehydrogenase, hydrophobic membrane anchor protein, putative  49.59 
 
 		 131 aa  122  2e-27  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_1966  succinate dehydrogenase hydrophobic membrane anchor  47.15 
 
 		 135 aa  120  8e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.192092 
 
 
-
 
NC_009667  Oant_0952  succinate dehydrogenase hydrophobic membrane anchor  47.15 
 
 		 131 aa  117  3.9999999999999996e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.676521  n/a   
 
 
-
 
NC_010581  Bind_2750  succinate dehydrogenase, hydrophobic membrane anchor protein  50.41 
 
 		 130 aa  114  3e-25  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_4277  succinate dehydrogenase, hydrophobic membrane anchor protein  45.53 
 
 		 139 aa  114  5e-25  Methylobacterium populi BJ001  Bacteria  normal  0.692368  normal  0.965438 
 
 
-
 
NC_010172  Mext_3601  succinate dehydrogenase, hydrophobic membrane anchor protein  43.9 
 
 		 139 aa  111  4.0000000000000004e-24  Methylobacterium extorquens PA1  Bacteria  normal  0.0736554  normal  1 
 
 
-
 
NC_011757  Mchl_3893  succinate dehydrogenase, hydrophobic membrane anchor protein  43.9 
 
 		 139 aa  111  4.0000000000000004e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.20647  normal  1 
 
 
-
 
NC_012850  Rleg_3979  succinate dehydrogenase, hydrophobic membrane anchor protein  47.11 
 
 		 126 aa  110  6e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.705456  normal  0.476216 
 
 
-
 
NC_011894  Mnod_7245  succinate dehydrogenase, hydrophobic membrane anchor protein  42.98 
 
 		 137 aa  109  1.0000000000000001e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.396127  n/a   
 
 
-
 
NC_011369  Rleg2_3691  succinate dehydrogenase, hydrophobic membrane anchor protein  46.28 
 
 		 126 aa  108  2.0000000000000002e-23  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_6039  succinate dehydrogenase, hydrophobic membrane anchor protein  41.32 
 
 		 137 aa  107  7.000000000000001e-23  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.0685536 
 
 
-
 
NC_009636  Smed_2958  succinate dehydrogenase hydrophobic membrane anchor  46.03 
 
 		 126 aa  106  1e-22  Sinorhizobium medicae WSM419  Bacteria  normal  0.0363094  normal  1 
 
 
-
 
NC_011666  Msil_3564  succinate dehydrogenase, hydrophobic membrane anchor protein  42.02 
 
 		 129 aa  100  6e-21  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011989  Avi_4136  succinate dehydrogenase hydrophobic membrane anchor  41.32 
 
 		 126 aa  99.8  1e-20  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008254  Meso_3245  succinate dehydrogenase subunit D  42.28 
 
 		 127 aa  99.8  1e-20  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009719  Plav_1434  succinate dehydrogenase hydrophobic membrane anchor  45.53 
 
 		 141 aa  97.8  4e-20  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008048  Sala_3031  succinate dehydrogenase, cytochrome b subunit  38.33 
 
 		 134 aa  85.9  2e-16  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010717  PXO_00603  succinate dehydrogenase, hydrophobic membrane anchor protein  41.8 
 
 		 128 aa  85.9  2e-16  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_012853  Rleg_5889  succinate dehydrogenase, hydrophobic membrane anchor protein  38.98 
 
 		 127 aa  84.3  5e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002977  MCA1549  succinate dehydrogenase, hydrophobic membrane anchor protein, putative  38.66 
 
 		 126 aa  84.3  5e-16  Methylococcus capsulatus str. Bath  Bacteria  normal  0.591464  n/a   
 
 
-
 
NC_012853  Rleg_5819  succinate dehydrogenase, hydrophobic membrane anchor protein  37.5 
 
 		 127 aa  83.2  0.000000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010577  XfasM23_0343  succinate dehydrogenase, hydrophobic membrane anchor protein  39.34 
 
 		 127 aa  82.8  0.000000000000001  Xylella fastidiosa M23  Bacteria  normal  1  n/a   
 
 
-
 
NC_010513  Xfasm12_0379  succinate dehydrogenase hydrophobic membrane anchor subunit  39.34 
 
 		 127 aa  82.8  0.000000000000002  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_1311  succinate dehydrogenase subunit D  34.71 
 
 		 129 aa  81.3  0.000000000000004  Sphingomonas wittichii RW1  Bacteria  normal  0.0693068  normal  1 
 
 
-
 
NC_008783  BARBAKC583_0089  succinate dehydrogenase, hydrophobic membrane anchor protein  34.68 
 
 		 128 aa  81.3  0.000000000000004  Bartonella bacilliformis KC583  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_2847  succinate dehydrogenase subunit D  39.17 
 
 		 123 aa  80.5  0.000000000000007  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_1536  succinate dehydrogenase, hydrophobic membrane anchor protein  41.13 
 
 		 128 aa  79.3  0.00000000000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_0458  succinate dehydrogenase, hydrophobic membrane anchor protein  39.39 
 
 		 139 aa  75.9  0.0000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.152846  normal  1 
 
 
-
 
NC_008340  Mlg_1333  succinate dehydrogenase subunit D  35.43 
 
 		 126 aa  73.9  0.0000000000007  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.934114 
 
 
-
 
NC_009484  Acry_1880  succinate dehydrogenase, cytochrome b subunit  38.84 
 
 		 125 aa  72  0.000000000002  Acidiphilium cryptum JF-5  Bacteria  normal  0.519683  n/a   
 
 
-
 
NC_011365  Gdia_2108  succinate dehydrogenase, hydrophobic membrane anchor protein  33.61 
 
 		 140 aa  66.2  0.0000000001  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008789  Hhal_0045  succinate dehydrogenase, cytochrome b subunit  35.43 
 
 		 127 aa  62.8  0.000000001  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A1203  succinate dehydrogenase subunit D  33.33 
 
 		 128 aa  63.2  0.000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.767553  n/a   
 
 
-
 
NC_007794  Saro_1745  succinate dehydrogenase subunit D  31.4 
 
 		 127 aa  60.5  0.000000007  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.287201  n/a   
 
 
-
 
NC_008686  Pden_0568  putative succinate dehydrogenase, hydrophobic membrane anchor protein  33.88 
 
 		 129 aa  59.3  0.00000002  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.0825505 
 
 
-
 
NC_007802  Jann_0810  succinate dehydrogenase subunit D  29.57 
 
 		 123 aa  58.2  0.00000003  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.851404 
 
 
-
 
NC_008687  Pden_3020  succinate dehydrogenase, cytochrome b subunit  30.09 
 
 		 127 aa  53.1  0.000001  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.915417 
 
 
-
 
NC_010338  Caul_4839  succinate dehydrogenase, hydrophobic membrane anchor protein  31.4 
 
 		 135 aa  53.5  0.000001  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_0087  hypothetical protein  31.09 
 
 		 123 aa  51.6  0.000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.5065  normal  1 
 
 
-
 
NC_009049  Rsph17029_2635  putative succinate dehydrogenase, hydrophobic membrane anchor protein  30.25 
 
 		 123 aa  50.8  0.000006  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_0975  succinate dehydrogenase subunit D  30.25 
 
 		 123 aa  50.8  0.000006  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007614  Nmul_A0862  succinate dehydrogenase, cytochrome b subunit  28.89 
 
 		 120 aa  47.8  0.00005  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_1800  succinate dehydrogenase, cytochrome b subunit  31 
 
 		 121 aa  42.7  0.001  Rhodoferax ferrireducens T118  Bacteria  normal  0.211028  n/a   
 
 
-
 
NC_008782  Ajs_2794  succinate dehydrogenase subunit D  29.59 
 
 		 121 aa  42.4  0.002  Acidovorax sp. JS42  Bacteria  normal  1  normal  0.104306 
 
 
-
 
NC_008752  Aave_2203  succinate dehydrogenase subunit D  30.95 
 
 		 121 aa  41.6  0.003  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  0.929187 
 
 
-
 
NC_009524  PsycPRwf_0262  succinate dehydrogenase, hydrophobic membrane anchor  37.37 
 
 		 127 aa  41.6  0.003  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  0.801835 
 
 
-
 
NC_002978  WD1222  succinate dehydrogenase, hydrophobic membrane anchor protein, putative  27.96 
 
 		 118 aa  40.4  0.007  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  1  n/a   
 
 
-
 
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