17 homologs were found in PanDaTox collection
for query gene Mmc1_3184 on replicon NC_008576
Organism: Magnetococcus sp. MC-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008576  Mmc1_3184  calcium-binding EF-hand-containing protein  100 
 
 		 225 aa  438  9.999999999999999e-123  Magnetococcus sp. MC-1  Bacteria  normal  0.53519  normal  0.491229 
 
 
-
 
NC_003295  RSc3104  putative calcium binding signal peptide protein  31.97 
 
 		 194 aa  57  0.0000002  Ralstonia solanacearum GMI1000  Bacteria  normal  0.801881  normal  1 
 
 
-
 
NC_012856  Rpic12D_3042  putative signal transduction protein with EFhand domain protein  31.58 
 
 		 205 aa  55.5  0.0000006  Ralstonia pickettii 12D  Bacteria  normal  0.6189  normal  1 
 
 
-
 
NC_008709  Ping_0991  calcium-binding EF-hand-containing protein  28.32 
 
 		 194 aa  55.5  0.0000007  Psychromonas ingrahamii 37  Bacteria  normal  0.0245104  normal  0.296766 
 
 
-
 
NC_010682  Rpic_3389  putative signal transduction protein with EFhand domain  31.58 
 
 		 205 aa  55.5  0.0000007  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_6104  calcium-binding protein  33.33 
 
 		 188 aa  52.8  0.000004  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_1867  calcium-binding protein  33.33 
 
 		 148 aa  52.4  0.000006  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008044  TM1040_0488  calcium-binding EF-hand  28.7 
 
 		 155 aa  52  0.000007  Ruegeria sp. TM1040  Bacteria  normal  0.0133587  normal  0.146102 
 
 
-
 
NC_007802  Jann_3135  calcium-binding EF-hand  30.83 
 
 		 164 aa  48.9  0.00006  Jannaschia sp. CCS1  Bacteria  normal  0.850385  normal  0.160414 
 
 
-
 
NC_007973  Rmet_3380  signal transduction protein  29.58 
 
 		 209 aa  47  0.0003  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_0416  calcium-binding EF-hand domain-containing protein  36.61 
 
 		 218 aa  46.6  0.0003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_2073  signal transduction protein  35.71 
 
 		 212 aa  45.1  0.0008  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0851765  normal  1 
 
 
-
 
NC_011884  Cyan7425_2893  Calcium-binding EF-hand-containing protein  24.35 
 
 		 189 aa  43.5  0.002  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.815095 
 
 
-
 
NC_008044  TM1040_2178  hypothetical protein  25.16 
 
 		 167 aa  42.7  0.004  Ruegeria sp. TM1040  Bacteria  normal  0.0312897  normal  1 
 
 
-
 
NC_011894  Mnod_4161  Calcium-binding EF-hand-containing protein  29.46 
 
 		 139 aa  42.4  0.005  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011769  DvMF_0796  Calcium-binding EF-hand-containing protein  31.97 
 
 		 330 aa  42  0.008  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.785217 
 
 
-
 
NC_009719  Plav_0950  signal transduction protein  26.67 
 
 		 242 aa  41.6  0.009  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>