Gene Plav_0950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0950 
Symbol 
ID5456387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1024901 
End bp1025629 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content62% 
IMG OID640876521 
Productsignal transduction protein 
Protein accessionYP_001412230 
Protein GI154251406 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAC TTGGCAAAAT GAAACTCGGT CTGCTCGGCG CGGCCTCCGC TTTGGCTCTG 
GCTGTCGCCA TTCCGGCGAT GTCACATGCC GAACCCGGCA AGGGCGGCCA TGCGGCCCGA
ATGTTTGAAA CGGTAGACAC CGACAAGAGC GGCGACATTT CACAGGCCGA GGCCCGCGCC
GCCGCCGAGA AGCGCTTCAA CGCGATGGAT GCCGATGGTG ACGGTGTCGT CACCAAGGCC
GAGGCCGATG CGGCGGAGGA AAAGTTCCGT GACGTTATGA AGAAGCGTCA CGCGAATCCC
GAAGAGCGCT TCGCCGCGGC GGATGCCGAT GGCGACGGCA AGGTGACGCT CGACGAATTG
AAGGCCGCCG CTGAGAAGCG CATGACCGAA CGTGGCAAGG AAGGCTCGAG CGAACGTCAC
GCCACCCGCC TCGAAAGCTG GTTTGGTTCC GCCGACAAGG ATGGCGATGG CGCCCTTACG
CTTGAGGAAA TGAAGGCAGC CGGCAAGGAT CGCAAGCACG TTTACAGCGA AAAGCGTGAA
GGCAAGCGTG GTGACTTTTT CGGTCGTCTC GACGCGGATG GCGATGGCCA GATCACAAAA
GCTGAAGCGA TGGCGGCTGC GGACAGGATG TTCGAGAAGA TGGACGCCAA CAGCGACGGC
AAGGTCGAGA AGGGCGAACT CCGGCATGGC AAGCCCGGCA AGGGTGCGGA AAAGCCCAAA
GCCGAGTAG
 
Protein sequence
MLKLGKMKLG LLGAASALAL AVAIPAMSHA EPGKGGHAAR MFETVDTDKS GDISQAEARA 
AAEKRFNAMD ADGDGVVTKA EADAAEEKFR DVMKKRHANP EERFAAADAD GDGKVTLDEL
KAAAEKRMTE RGKEGSSERH ATRLESWFGS ADKDGDGALT LEEMKAAGKD RKHVYSEKRE
GKRGDFFGRL DADGDGQITK AEAMAAADRM FEKMDANSDG KVEKGELRHG KPGKGAEKPK
AE