Gene Rpic_3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3389 
Symbol 
ID6288945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3549270 
End bp3549887 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content67% 
IMG OID642626974 
Productputative signal transduction protein with EFhand domain 
Protein accessionYP_001900942 
Protein GI187930455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACA AACGTGCTGT CCAAGCCTTC CTCGCCACCT CGGCCCTGTT CCTGGCCATG 
TCGGGCATGA ACGCCCGCGC TCAGGATGCC AGTGCCCCCG CTGCCAGCGC ACAGGCGCCG
GCCACCGCCA CGGTACCGGC CGCGCCGCAA CCTGACGCCC GCGCAGGCAA GCCCGGCCAC
CATGGCGGCT TCAAGGCCAT CGACACCAAC GGCGACGGCC AGGTCTCGCG CGACGAGGCC
AAGGGCCACG CGTGGCTTGA AAAGAACTTC GACCAGATCG ATACCAACCA CGACGGCCAA
CTGAGCAAGG ACGAGCTGGC CGCTTGGCAC AAGGCCCACA AGGGCGAGAT GCACGAAAAG
ATGGCGCAGC GCTTGGACGC CAAGTTCAAG GCGGCCGACA AGGACAACGA TGGCAGCCTG
ACCAAGGACG AAGTGCAGGC CGGCATGCCG CGTCTGGCCA AGAACTTCGA CCAGATCGAC
GCCAACCACG ACGGCAAGAT CACCGAAGAC GAGATCCGCG CTTACATGAA GGCCCGCCAC
GACGCCCGCA AGGCGCAGAA GAACACCCCG GCGGCCGCTG CCATGCCGGG TGGCCCGTCG
GCGACGAAGG GCGAGTGA
 
Protein sequence
MTNKRAVQAF LATSALFLAM SGMNARAQDA SAPAASAQAP ATATVPAAPQ PDARAGKPGH 
HGGFKAIDTN GDGQVSRDEA KGHAWLEKNF DQIDTNHDGQ LSKDELAAWH KAHKGEMHEK
MAQRLDAKFK AADKDNDGSL TKDEVQAGMP RLAKNFDQID ANHDGKITED EIRAYMKARH
DARKAQKNTP AAAAMPGGPS ATKGE