12 homologs were found in PanDaTox collection
for query gene Lcho_4368 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_4368  putative transcriptional regulator  100 
 
 		 255 aa  518  1e-146  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007404  Tbd_1077  transcriptional regulator  31.33 
 
 		 448 aa  66.2  0.0000000005  Thiobacillus denitrificans ATCC 25259  Bacteria  decreased coverage  0.000000030584  normal  0.489664 
 
 
-
 
NC_009092  Shew_1142  putative transcriptional regulator  29.95 
 
 		 462 aa  63.9  0.000000003  Shewanella loihica PV-4  Bacteria  normal  1  normal  0.0435134 
 
 
-
 
NC_011894  Mnod_2425  putative transcriptional regulator  27.14 
 
 		 472 aa  51.6  0.00001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312863  n/a   
 
 
-
 
NC_010831  Cphamn1_0967  putative transcriptional regulator  29.86 
 
 		 241 aa  50.1  0.00004  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_3604  putative transcriptional regulator  27.42 
 
 		 422 aa  47.4  0.0002  Acidovorax sp. JS42  Bacteria  normal  0.0147385  normal  1 
 
 
-
 
NC_011059  Paes_1509  putative transcriptional regulator  30.94 
 
 		 223 aa  46.2  0.0005  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.452011  normal  1 
 
 
-
 
NC_009953  Sare_3033  hypothetical protein  29.77 
 
 		 756 aa  45.8  0.0007  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008786  Veis_2628  putative transcriptional regulator  30.1 
 
 		 423 aa  43.9  0.002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.0334765 
 
 
-
 
NC_002977  MCA3010  hypothetical protein  30.11 
 
 		 423 aa  43.9  0.003  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_009634  Mevan_0081  putative transcriptional regulator  39.62 
 
 		 485 aa  42.7  0.006  Methanococcus vannielii SB  Archaea  normal  1  n/a   
 
 
-
 
NC_010816  BLD_0636  putative transcriptional regulator  24.39 
 
 		 492 aa  42.4  0.007  Bifidobacterium longum DJO10A  Bacteria  normal  0.242248  n/a   
 
 
-
 
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