Gene Veis_2628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2628 
Symbol 
ID4691164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2970180 
End bp2971451 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content60% 
IMG OID639850392 
Productputative transcriptional regulator 
Protein accessionYP_997389 
Protein GI121609582 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0334765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGCAA CCCGCAGCGA ACTGCTGGAA AAAATCCGTC TGGGCGAAGA CAGTTTTCTG 
GAGATGAAAG AAGTGAAGTT CGCCGGAGGC AAAGTCCGTG GGCCAACGCA AGATGGGGTG
GCCAACGAAT TGGCCGCCTT TGCCAATAGC GCGGGCGGCG TGCTGTTGCT GGGAGTGGAG
GACACCAGCC GTACAGTAAT CGGCATCGAA CTGGATAAGC TCGATGCGGT GGAGACTGTG
CTGCGTGAAG CCTGTGAACA ATCCATCAAG CCGCCGCTGG CCCCCATCAT CGAGCGCCTG
ACCCTGCCCG ATGCGGGAGG CATCGAGCAG CCTGTCATCC GTGTCGAGGT CAAGCGCAGC
TTGTTCGTGC ATCAAAGTCC CGGCGGTTAT TTGCAGCGCG TGGGTTCTTC CAGGCGGCCC
ATTCCTCCAG ATCAACTGGC GCGACTGTTC CAGCAACGCA GCCAGTCGCG CTTGATCCGG
TTTGATGAAA TGCCCGTTCC CGGCGCGACG TTGGAGCCTC TGTGCGAAGA CTTGTGGCGT
CGTTTCGTGG TGAGCGAAGG CGCAGCGCCG CGTGAAGTTG CGTTGCGCAA GCTGGCGATG
GCCGCGCAGG ACGATGATGG AGCTTGGCGG CCAACGGTTG CGGGGTTGTT GCTGGGCAGC
GAACGGCCTC AGGAATTTCT GCCTTCTGCC TATATCCAGG CGGTTGCGTA TCAGGGCACG
ACGGTGGTGC CGCAAGGGGA GTCCGCCTAC CAGATCGATG CAAGCGATAT GACCGGCCCG
CTTGATCGGC AAATTCATGC TGCCTGCGCC TTTGTGCGCA AGAACATGCA AGTCGCCGCC
TTCAAGCAAC AGCATGGCGG GCGTGTGGAT ATGCCGCAGT TCTCGATGCG GGCGGTGTTT
GAAGCCATCA CCAATGCCGT GGCGCATCGG GATTACTCGA TTCATGGCGC CAAGGTACGG
CTGCGCCTGT TTGCGGATCG CCTCGAAATT TATTCACCGG GCATGTTGCC CAACACGATG
GATACGGAGA GCCTGGTGGA GCGTCAATCC GCGCGCAATG AGGCCCTCGC CAGTCTGCTT
GCGCGTTGTC CGATGGAAGA CTCGAGCTTC GCGCCCTATC GGAACTTCAT CATGGATCGT
CGCGGCGAGG GTGTTCCAAT CATCTTGCGC GAGACGCTCG AACTTGGCGG CAAGCCAGCA
CATTACCGAA TGATTGATCA GAGCGAGCTT CTTCTTGTCA TTCCGGCAGC GAATCCGGAG
GCCCAGCCAT GA
 
Protein sequence
MLATRSELLE KIRLGEDSFL EMKEVKFAGG KVRGPTQDGV ANELAAFANS AGGVLLLGVE 
DTSRTVIGIE LDKLDAVETV LREACEQSIK PPLAPIIERL TLPDAGGIEQ PVIRVEVKRS
LFVHQSPGGY LQRVGSSRRP IPPDQLARLF QQRSQSRLIR FDEMPVPGAT LEPLCEDLWR
RFVVSEGAAP REVALRKLAM AAQDDDGAWR PTVAGLLLGS ERPQEFLPSA YIQAVAYQGT
TVVPQGESAY QIDASDMTGP LDRQIHAACA FVRKNMQVAA FKQQHGGRVD MPQFSMRAVF
EAITNAVAHR DYSIHGAKVR LRLFADRLEI YSPGMLPNTM DTESLVERQS ARNEALASLL
ARCPMEDSSF APYRNFIMDR RGEGVPIILR ETLELGGKPA HYRMIDQSEL LLVIPAANPE
AQP