| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_2425 |
|---|
| Symbol | |
|---|
| ID | 7301804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 2508611 |
|---|
| End bp | 2510029 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643600152 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_002497699 |
|---|
| Protein GI | 220922397 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0312863 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGACA TCTTTCAAAT TTCCTACGAC GAAGCGTTGG CCCTATGCAG CCGCAATGAG
GGTGACTTGT TTGACCACAA GGCGGCAAAG ATCGAAGCTA GAAAGGTCGA GAAAATTGCA
GTCGCTTTTG CTAATTCTGA TGGCGGAGAG TTTGTAATCG GAATTGCCGA TAGCAAAGAC
GAGCCTGATC CTGCCAAAAG ATGGCAAGGG GCTGCCGCCC CTGAATCCTA CAATGGAATT
CTACAAGCCT TGTTCAATTT GAACCCGGCG GTCGACTTCC GGCATGAGTT TCTACAAGCA
GACAAAATGC CGGGTATCGC AATGCGCGTC TATATTGACA AATGCCCGAA CGTCGCGAAA
GCGTCCGACG GCAAAGTTTA TCAGCGGGTC GGAGCGCAGT CGCTCCCAAT TACCGATCCG
GACAAGATAA CCGCGCTTTC TTTTGCAAAG GGCGCCGCGA GTTATGAGGA CACACTACTC
AATCTCGACC CTGAAGAGAT CGTAGAGAGT CGAGAAATAG CAGCATTCAC GCGCGACCTA
GCGCCAGTCA CACATCCGCT CGCTTACTGC GTTAACGAAG GGCTAGTAGA CCGCAAGACT
TTTGCACCAA GTTGCGCCGG CGTCCTCCTG TTTTCTGATC GGCCGCAGCC TATGTTTCCA
CGCCGCTGTG CAATCAAGGT TATCTTCTAT GATACACGCC AAGAAGCTCC CGAGCGAGAA
CACCTGAAGG TCAACAAAAC TGTCGAGGGG CCACTTTATA GGCAAATCCA CGAAGCTGCT
CGGTTAGTAA CGGACATTAT GTCTAGCATT AGCATTATGA CGCCTGAGGG GCTGCAGCGC
GTAAAATACC CCCCCGAAGC GATATGGGAG ATACTTGTTA ATGCGGTTAT ACACCGTGAC
TACTCAATCG CCGATGACAT TCAGATTGTG ATATACCAGA ACCGAATTGA GATAAGAAGT
CCAGGAAGGT TGCCGGGGTT TGTAACCACG GAGAATTTTC TGGACGTTCG TTACAGCCGT
AACTCCAAAA TCGTCCGCAG TCTCGCAAAA TATAAAGACG CGCCCAACAA AGATCTTGGC
GAGGGCCTTA ACACTGCCTT TGAAAAAATG AAGGAGTGGA AGTTAAAAAG CCCAACTTTG
GTCGAAGACG GTAACTATGT GCTCGTCACC ATCCCGCATA CACCTTTGGC CTCGCCCGAG
GAACTCGTAA TGGAATACCT GCAGAAGCAC CCTGAAATCA AAAACAAGCA GGCACGAGAG
ATTACAGGTA TTAAGTCAGA AAACCAAATG AAGGAGGTAT TTTATCGCTT GCGCGACAAG
GGCTTGATTG AGCTGATAGC GGGCCGCAAG GGCAATGCTG CGGCGTGGCA GCTCGTACCG
GCGCCCGTTG AGAATGAAGC CAGTCCACCG GTGGCATGA
|
|---|
| Protein sequence | MPDIFQISYD EALALCSRNE GDLFDHKAAK IEARKVEKIA VAFANSDGGE FVIGIADSKD
EPDPAKRWQG AAAPESYNGI LQALFNLNPA VDFRHEFLQA DKMPGIAMRV YIDKCPNVAK
ASDGKVYQRV GAQSLPITDP DKITALSFAK GAASYEDTLL NLDPEEIVES REIAAFTRDL
APVTHPLAYC VNEGLVDRKT FAPSCAGVLL FSDRPQPMFP RRCAIKVIFY DTRQEAPERE
HLKVNKTVEG PLYRQIHEAA RLVTDIMSSI SIMTPEGLQR VKYPPEAIWE ILVNAVIHRD
YSIADDIQIV IYQNRIEIRS PGRLPGFVTT ENFLDVRYSR NSKIVRSLAK YKDAPNKDLG
EGLNTAFEKM KEWKLKSPTL VEDGNYVLVT IPHTPLASPE ELVMEYLQKH PEIKNKQARE
ITGIKSENQM KEVFYRLRDK GLIELIAGRK GNAAAWQLVP APVENEASPP VA
|
|---|
| |