| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4368 |
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| Symbol | |
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| ID | 6161178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4885633 |
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| End bp | 4886400 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641667145 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001793384 |
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| Protein GI | 171061035 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAACA CAACAATCCG GACCCAGATC GCACAGAAAT TACCCATGAA CATCCACGAC
GAATCCCCGG CTCAATCCGA AGTGCTGGTC AAGGCATTGA TCGGTATGGG AGAGACTCGC
CAGCGCGAGT TCAAGCGTGT CAGCGGGAAG ATGGTCGGCA AGGCACTCGA AACGATCTGT
GGTCTGGCCA ATGGCGAGGG CGGCGTGCTG GTATTGGGCG TGGCAGACCT CAAGGAGCAT
CAAGGCCCGG CGCGGCTGTT CGGCGTCGAA GAAAACCCGG AGGCCGTGGA CGAACTGCAG
CGCAAGTTGC TGAGCGAGTT CCAGCCGGCG ATTGAAACCA TTCGCCTGCG GCGCCTGCCC
TGCCCGCTGC ACAACGGTCC CGCCAAAGGC CAGCCCGGAC ATCTGCTGCT GGTACAGGTC
GAGCGCAGTC CCGCGGTGCA CTCGATCACG AACGGCGGAA CCTACGCCCG GCTGGACGCA
GGCAATCGGC AGATGACCGC CAGCGAAGTC ACCGAGTTGT CCTACCGACG CGGCGTCAGA
AGTGCCGCGA GCGAACCGGT TGCGGTTGCA CTGGAGCGCT TGCAGACCGA GGCGTGGCGC
CGCTTCGTAT CAGCCCGAGG ACTGCGCTCG GGCACGTTTC CCGAGCAGTT GCTGCGAGTG
GGTCTGGCGT TTGTTATCTC CACTGGAAGA AAACAATGCA CAAGAAGGGA ATTAATTCAA
TCCGATCAAT CACTTGGCGT GTGGTTTGTT TTCTTCGCAT GCGAGTGA
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| Protein sequence | MANTTIRTQI AQKLPMNIHD ESPAQSEVLV KALIGMGETR QREFKRVSGK MVGKALETIC
GLANGEGGVL VLGVADLKEH QGPARLFGVE ENPEAVDELQ RKLLSEFQPA IETIRLRRLP
CPLHNGPAKG QPGHLLLVQV ERSPAVHSIT NGGTYARLDA GNRQMTASEV TELSYRRGVR
SAASEPVAVA LERLQTEAWR RFVSARGLRS GTFPEQLLRV GLAFVISTGR KQCTRRELIQ
SDQSLGVWFV FFACE
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