| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0081 |
|---|
| Symbol | |
|---|
| ID | 5324624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | + |
|---|
| Start bp | 80350 |
|---|
| End bp | 81807 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 640785749 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_001322607 |
|---|
| Protein GI | 150398840 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACC AAAGAATTAA AGAAATACTT AAAAAAGGAG AAGGAATTTC AGTTGAATTT
AAAGAATGTA AAGATGAAAT TCCTCAAAGT GCTTATGAAA CGGTTTGTGC ATTTCTTAAC
AGAAACGGCG GAGATATTCT TTTAGGTGTA AAAGATAATA AAGAAATTCA AGGAATAAAT
AAAGATAAAA TAGAACAAAT AAAAAAAAAT TTTGTAACTG CAATAAACAA TCCTCAAAAA
ATGTCACCTC CTGTTTATCT TTCAATTCAA GAAGTAACTA TAAATAATAA ACAAATTCTG
CACATTTACG TCCCTGTTGG TTCTCAAGTT CAAAAATGCA AAAATAGAAT ATTTGACCGA
AACGAAGATG GGGATTTAGA TATAACAAAT AATCAAACAC TCATAACTCA ATTATACTTA
AAAAAGCAAA CAACTTACTC TGAAAATACA GTTTATCCGT ATTGTGAACT AAAAGATTTA
GATGAAAATT TAATAAATAA AGCAAGAAAA TTAGCTGTAA ATCAAAACAA TACTCATCCT
TGGAAGGAAA TGACTAATTT AGAATTATTA AAAAGTGCTA AATTATATTC AAAAGATTAT
CAAATCAATA AAGAAGGAAT AACTTTAGCA GGAATTTTAT TATTTGGAAA AGAACAAACA
ATTTTATCAG TTTTGCCACA CCATAAAACA GATTTAATCT TAAGAAAAGT GAATTTAGAT
AGATACGATG ATAGGGATGA TGTTCGAATA AACTTAATTG ATAGTTATGA AAGAATAATT
GCTTTTGGAG AAAAACATTT ACTAGACCCC TTTTATCTTG AAGGTACTCA AAGAATAAGC
GTTAGAAATA AAATTTTAAG AGAAATTGCA TCAAATATTT TAATGCACAG GGAATTTACA
AATCCTTTTC CTGCAAAATT CATAATTGAA AAAAACCAAA TAAAAACCGA AAATGCAAAT
AAGCCTCACG GACATGGAAA AATAAATCCA AATAATTTTT CTCCGTATCC TAAAAATCCT
GTAATCGCAA GAGTCTTTAA AGAAATTGGT TTTGCTGATG AATTAGGCTC AGGAATAAGA
AATCTTACTA AATATGTTAA AATCTATTCA AATAAAGAAC CTGAACTAAT TGAAAATGAT
ATTTTTACAA TTATAATACC ATTAAACGAG CAAGATACCC AGCAAGATAC CCAGCAAGAT
ACCCAGCAAG ATACCCAGCA AGATACCCAG CAAGATACCC AGCAAGATGA AATCTTAAAA
TTCTGTCAAA CTCCAAAAAC AAGGGGGGAA ATACAAAAAC ATATCTCTAT AAAAGATAGA
GAACATTTTA GAAAATCAAT ACTAATTCCA TTATTAGAAA AAGAACTAAT TGGATTAACA
ATTCCAGATA AACCAACAAG TAAAAATCAA AAATACGTAA CAACTAAAAA AGGTTTAGAA
CATTTAAAAA AAAGGTAA
|
|---|
| Protein sequence | MKNQRIKEIL KKGEGISVEF KECKDEIPQS AYETVCAFLN RNGGDILLGV KDNKEIQGIN
KDKIEQIKKN FVTAINNPQK MSPPVYLSIQ EVTINNKQIL HIYVPVGSQV QKCKNRIFDR
NEDGDLDITN NQTLITQLYL KKQTTYSENT VYPYCELKDL DENLINKARK LAVNQNNTHP
WKEMTNLELL KSAKLYSKDY QINKEGITLA GILLFGKEQT ILSVLPHHKT DLILRKVNLD
RYDDRDDVRI NLIDSYERII AFGEKHLLDP FYLEGTQRIS VRNKILREIA SNILMHREFT
NPFPAKFIIE KNQIKTENAN KPHGHGKINP NNFSPYPKNP VIARVFKEIG FADELGSGIR
NLTKYVKIYS NKEPELIEND IFTIIIPLNE QDTQQDTQQD TQQDTQQDTQ QDTQQDEILK
FCQTPKTRGE IQKHISIKDR EHFRKSILIP LLEKELIGLT IPDKPTSKNQ KYVTTKKGLE
HLKKR
|
|---|
| |